Pre_GI: BLASTP Hits

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Query: NC_011660:2839201:2842658 Listeria monocytogenes HCC23 chromosome, complete genome

Start: 2842658, End: 2843224, Length: 567

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: Listeria monocytogenes HCC23 was isolated from channel catfish. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor". There are 13 serovars associated with Listeria monocytogenes, and the serovar 4b strains are more commonly associated with invasive disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012488:2719955:273635627363562736922567Listeria monocytogenes Clip81459, complete genomeTetR family transcriptional regulator2e-98357
NC_002973:2701983:271838427183842718950567Listeria monocytogenes str. 4b F2365, complete genometranscriptional regulator, TetR family2e-98357
NC_013768:171889:175123175123175689567Listeria monocytogenes 08-5923, complete genomehypothetical protein7e-98355
NC_013766:171889:175123175123175689567Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein7e-98355
NC_003210:2749538:276620727662072766773567Listeria monocytogenes EGD-e, complete genomehypothetical protein7e-98355
NC_003212:2837366:285543728554372856003567Listeria innocua Clip11262, complete genomehypothetical protein5e-96349
NC_013891:2643085:266066926606692661235567Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomesimilar to transcription regulator, TetR family3e-94343
NC_015391:695350:713101713101713697597Carnobacterium sp. 17-4 chromosome, complete genomeputative transcriptional regulator3e-1581.3
NC_007509:309348:317129317129317758630Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, TetR family4e-0651.2
NC_020410:3326944:333221333322133332839627Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeUncharacterized HTH-type transcriptional regulator yvkB6e-0650.4