Pre_GI: BLASTN Hits

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Query: NC_011601:846358 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 846358, End: 867865, Length: 21508

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007613:76123476123478018918956Shigella boydii Sb227, complete genome05656BLASTN svgBLASTP svg
NC_011149:28021992802199282596423766Salmonella enterica subsp. enterica serovar Agona str. SL483,03164BLASTN svgBLASTP svg
NC_003198:44534574453457450773054274Salmonella enterica subsp. enterica serovar Typhi str. CT18,02111BLASTN svgBLASTP svg
NC_006511:26779642677964270110823145Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC02008BLASTN svgBLASTP svg
NC_003197:28702682870268289109020823Salmonella typhimurium LT2, complete genome01635BLASTN svgBLASTP svg
NC_020260:31280531280533684424040Cronobacter sakazakii Sp291, complete genome01233BLASTN svgBLASTP svg
NC_014837:37664263766426379523728812Pantoea sp. At-9b chromosome, complete genome01082BLASTN svgBLASTP svg
NC_014306:12447211244721126333018610Erwinia billingiae Eb661, complete genome01017BLASTN svgBLASTP svg
NC_010694:61498561498564279627812Erwinia tasmaniensis, complete genome0674BLASTN svgBLASTP svg
NC_010102:21785942178594220346224869Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-151543BLASTN svgBLASTP svg
NC_011083:96726096726098909921840Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,4e-144519BLASTN svgBLASTP svg
NC_006905:94641894641897214125724Salmonella enterica subsp. enterica serovar Choleraesuis str4e-144519BLASTN svgBLASTP svg
NC_003197:92000092000094439424395Salmonella typhimurium LT2, complete genome9e-142511BLASTN svgBLASTP svg
NC_011080:92432692432694696322638Salmonella enterica subsp. enterica serovar Newport str. SL254,9e-142511BLASTN svgBLASTP svg
NC_013956:35257113525711354815922449Pantoea ananatis LMG 20103 chromosome, complete genome1e-134488BLASTN svgBLASTP svg
NC_014562:2871765*2871765290090029136Pantoea vagans C9-1 chromosome, complete genome4e-113416BLASTN svgBLASTP svg
NC_012962:49420004942000496422122222Photorhabdus asymbiotica, complete genome2e-59238BLASTN svgBLASTP svg
NC_003295:21117302111730213127819549Ralstonia solanacearum GMI1000, complete genome9e-37163BLASTN svgBLASTP svg
NC_015424:2726223*2726223277096744745Aeromonas veronii B565 chromosome, complete genome9e-34153BLASTN svgBLASTP svg
NC_012917:3565268*3565268359123425967Pectobacterium carotovorum subsp. carotovorum PC1, complete genome4e-33151BLASTN svgBLASTP svg
NC_014562:16982531698253172164923397Pantoea vagans C9-1 chromosome, complete genome3e-27131BLASTN svgBLASTP svg
NC_020211:45982174598217463062032404Serratia marcescens WW4, complete genome2e-25125BLASTN svgBLASTP svg
NC_012724:14745414745417238824935Burkholderia glumae BGR1 chromosome 1, complete genome3e-21111BLASTN svgBLASTP svg
NC_013592:80428880428883459430307Dickeya dadantii Ech586, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_014500:89413689413693546441329Dickeya dadantii 3937 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_020064:1611820*1611820163518523366Serratia marcescens FGI94, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015061:59624759624762407627830Rahnella sp. Y9602 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013850:33035003303500332954126042Klebsiella variicola At-22 chromosome, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009648:38036223803622385072747106Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013282:33896193389619341209922481Cronobacter turicensis, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_015061:15989201598920163040531486Rahnella sp. Y9602 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012660:1737423*1737423176616428742Pseudomonas fluorescens SBW25 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015061:27708562770856279559924744Rahnella sp. Y9602 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_020181:51825685182568520953926972Enterobacter aerogenes EA1509E, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014306:49013904901390494640145012Erwinia billingiae Eb661, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014306:43760124376012441784741836Erwinia billingiae Eb661, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015061:31112113111211313800526795Rahnella sp. Y9602 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_020209:32620003262000328797525976Pseudomonas poae RE*1-1-14, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012779:21275422127542216530837767Edwardsiella ictaluri 93-146, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013956:43263884326388435118724800Pantoea ananatis LMG 20103 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020211:31514583151458317575024293Serratia marcescens WW4, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_012917:3684840*3684840370871823879Pectobacterium carotovorum subsp. carotovorum PC1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009801:995396995396101946824073Escherichia coli E24377A, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014837:2458780*2458780248745128672Pantoea sp. At-9b chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003902:35140003514000353798123982Xanthomonas campestris pv. campestris str. ATCC 33913, complete3e-0661.9BLASTN svgBLASTP svg
NC_006155:2208686*2208686223242523740Yersinia pseudotuberculosis IP 32953, complete genome1e-0560BLASTN svgBLASTP svg
NC_010634:2124185*2124185214874924565Yersinia pseudotuberculosis PB1/+, complete genome1e-0560BLASTN svgBLASTP svg
NC_010943:325739*32573934942023682Stenotrophomonas maltophilia K279a, complete genome1e-0560BLASTN svgBLASTP svg
NC_012721:20218852021885204943027546Burkholderia glumae BGR1 chromosome 2, complete genome1e-0560BLASTN svgBLASTP svg
NC_014323:992978992978103436141384Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-0560BLASTN svgBLASTP svg
NC_004547:3866439*3866439389314026702Erwinia carotovora subsp. atroseptica SCRI1043, complete genome1e-0560BLASTN svgBLASTP svg