Pre_GI: BLASTN Hits

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Query: NC_011601:4856717 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 4856717, End: 4880599, Length: 23883

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004431:51233255123325514909025766Escherichia coli CFT073, complete genome010220BLASTN svgBLASTP svg
NC_008563:49051864905186492360518420Escherichia coli APEC O1, complete genome010210BLASTN svgBLASTP svg
NC_007946:48759974875997491969643700Escherichia coli UTI89, complete genome010210BLASTN svgBLASTP svg
NC_008253:48178644817864486276044897Escherichia coli 536, complete genome010150BLASTN svgBLASTP svg
NC_010498:49306494930649495591925271Escherichia coli SMS-3-5, complete genome09495BLASTN svgBLASTP svg
NC_011750:49780004978000500028022281Escherichia coli IAI39 chromosome, complete genome09422BLASTN svgBLASTP svg
NC_007613:44030704403070442929526226Shigella boydii Sb227, complete genome09416BLASTN svgBLASTP svg
NC_002695:5381576*5381576540611824543Escherichia coli O157:H7 str. Sakai, complete genome09309BLASTN svgBLASTP svg
CU928160:4570498*4570498461509944602Escherichia coli IAI1 chromosome, complete genome09309BLASTN svgBLASTP svg
CP002516:41991334199133422817229040Escherichia coli KO11, complete genome09301BLASTN svgBLASTP svg
CP002185:47918114791811481779025980Escherichia coli W, complete genome09301BLASTN svgBLASTP svg
NC_009800:4529504*4529504454809918596Escherichia coli HS, complete genome09299BLASTN svgBLASTP svg
NC_011751:50705975070597508906918473Escherichia coli UMN026 chromosome, complete genome09287BLASTN svgBLASTP svg
NC_000913:45282784528278455238424107Escherichia coli K12, complete genome09271BLASTN svgBLASTP svg
AC_000091:45349354534935455904124107Escherichia coli W3110 DNA, complete genome09271BLASTN svgBLASTP svg
NC_008258:4345400*4345400436989824499Shigella flexneri 5 str. 8401, complete genome09137BLASTN svgBLASTP svg
NC_004337:4374500*4374500439909924600Shigella flexneri 2a str. 301, complete genome09121BLASTN svgBLASTP svg
NC_004741:4364235*4364235438964325409Shigella flexneri 2a str. 2457T, complete genome09121BLASTN svgBLASTP svg
NC_009801:48826844882684490824525562Escherichia coli E24377A, complete genome07614BLASTN svgBLASTP svg
NC_010473:46303614630361465014819788Escherichia coli str. K-12 substr. DH10B, complete genome07263BLASTN svgBLASTP svg
AP010958:52728635272863529459921737Escherichia coli O103:H2 str. 12009 DNA, complete genome05816BLASTN svgBLASTP svg
CP002797:46563274656327468071624390Escherichia coli NA114, complete genome05449BLASTN svgBLASTP svg
NC_010498:48991674899167492274523579Escherichia coli SMS-3-5, complete genome02799BLASTN svgBLASTP svg
NC_002695:53525545352554537663924086Escherichia coli O157:H7 str. Sakai, complete genome01507BLASTN svgBLASTP svg
NC_002655:53825575382557540664224086Escherichia coli O157:H7 EDL933, complete genome01507BLASTN svgBLASTP svg
CP002516:42366804236680425575819079Escherichia coli KO11, complete genome01195BLASTN svgBLASTP svg
NC_005126:14250014250016059218093Photorhabdus luminescens subsp. laumondii TTO1, complete genome5e-122446BLASTN svgBLASTP svg
NC_003198:3881221*3881221390454423324Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-107398BLASTN svgBLASTP svg
NC_010468:4252940*4252940428159928660Escherichia coli ATCC 8739, complete genome1e-100375BLASTN svgBLASTP svg
NC_004342:3164500*3164500318332418825Leptospira interrogans serovar Lai str. 56601 chromosome I,2e-69272BLASTN svgBLASTP svg
NC_005823:1105524*1105524113560530082Leptospira interrogans serovar Copenhageni str. Fiocruz L1-1302e-69272BLASTN svgBLASTP svg
NC_010645:558974*55897458259923626Bordetella avium 197N, complete genome6e-66260BLASTN svgBLASTP svg
NC_007778:34706613470661350314632486Rhodopseudomonas palustris HaA2, complete genome1e-51212BLASTN svgBLASTP svg
NC_009053:31377931377933687823100Actinobacillus pleuropneumoniae L20, complete genome5e-45190BLASTN svgBLASTP svg
NC_003143:39874839874842431625569Yersinia pestis CO92, complete genome3e-37165BLASTN svgBLASTP svg
NC_004088:4202247*4202247422568123435Yersinia pestis KIM, complete genome3e-37165BLASTN svgBLASTP svg
NC_005810:43067164306716433058723872Yersinia pestis biovar Microtus str. 91001, complete genome3e-37165BLASTN svgBLASTP svg
NC_008149:31886031886034352424665Yersinia pestis Nepal516, complete genome3e-37165BLASTN svgBLASTP svg
NC_008150:43737224373722439711823397Yersinia pestis Antiqua, complete genome3e-37165BLASTN svgBLASTP svg
NC_010159:12880001288000132559537596Yersinia pestis Angola, complete genome3e-37165BLASTN svgBLASTP svg
NC_013850:4829455*4829455485950430050Klebsiella variicola At-22 chromosome, complete genome4e-36161BLASTN svgBLASTP svg
NC_003112:84400084400086636122362Neisseria meningitidis MC58, complete genome6e-35157BLASTN svgBLASTP svg
NC_010939:32149232149234388122390Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete2e-31145BLASTN svgBLASTP svg
NC_014752:15300001530000155313723138Neisseria lactamica ST-640, complete genome4e-30141BLASTN svgBLASTP svg
NC_010120:78800078800081026622267Neisseria meningitidis 053442, complete genome2e-28135BLASTN svgBLASTP svg
NC_003116:988000988000101010222103Neisseria meningitidis Z2491, complete genome1e-26129BLASTN svgBLASTP svg
NC_012917:32411963241196329451553320Pectobacterium carotovorum subsp. carotovorum PC1, complete genome5e-23117BLASTN svgBLASTP svg
NC_004431:1211000*1211000123322222223Escherichia coli CFT073, complete genome5e-23117BLASTN svgBLASTP svg
NC_012912:41674294167429418510117673Dickeya zeae Ech1591, complete genome1e-20109BLASTN svgBLASTP svg
NC_015144:47783477838793540153Weeksella virosa DSM 16922 chromosome, complete genome5e-20107BLASTN svgBLASTP svg
NC_012912:10536181053618108982736210Dickeya zeae Ech1591, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_007946:1119000*1119000114261923620Escherichia coli UTI89, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_012491:743883*74388378009936217Brevibacillus brevis NBRC 100599, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_006905:4638707*4638707467273934033Salmonella enterica subsp. enterica serovar Choleraesuis str1e-1489.7BLASTN svgBLASTP svg
NC_004631:4687270*4687270471022622957Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-1489.7BLASTN svgBLASTP svg
NC_011149:46774124677412471244835037Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-1487.7BLASTN svgBLASTP svg
NC_011080:47032664703266472876525500Salmonella enterica subsp. enterica serovar Newport str. SL254,5e-1487.7BLASTN svgBLASTP svg
NC_010102:4745949*4745949476837922431Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,8e-1383.8BLASTN svgBLASTP svg
NC_014121:677799*67779969989822100Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete8e-1383.8BLASTN svgBLASTP svg
NC_014655:13966721396672141972223051Leadbetterella byssophila DSM 17132 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
AC_000091:4501430*4501430452291521486Escherichia coli W3110 DNA, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_000913:44947734494773451470019928Escherichia coli K12, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010473:4596500*4596500461806621567Escherichia coli str. K-12 substr. DH10B, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011750:4947500*4947500496714419645Escherichia coli IAI39 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011751:49925004992500501338720888Escherichia coli UMN026 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_013961:441719*44171947879337075Erwinia amylovora, complete genome7e-1073.8BLASTN svgBLASTP svg
CP002185:4750571*4750571477251221942Escherichia coli W, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_002971:1379567*1379567140286123295Coxiella burnetii RSA 493, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_006368:32119983211998323023918242Legionella pneumophila str. Paris, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010117:1461502*1461502148409922598Coxiella burnetii RSA 331, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015968:511282*51128254179030509Enterobacter asburiae LF7a chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012912:4194821*4194821421439319573Dickeya zeae Ech1591, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012880:4117376*4117376413569218317Dickeya dadantii Ech703, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010067:3056774*3056774308172024947Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete3e-0661.9BLASTN svgBLASTP svg
NC_009832:622969*62296965041627448Serratia proteamaculans 568, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009648:5119271*5119271515776838498Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007613:4217557*4217557425611838562Shigella boydii Sb227, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004631:4661000*4661000468421223213Salmonella enterica subsp. enterica serovar Typhi Ty2, complete3e-0661.9BLASTN svgBLASTP svg
NC_003198:4676536*4676536471603539500Salmonella enterica subsp. enterica serovar Typhi str. CT18,3e-0661.9BLASTN svgBLASTP svg
NC_013282:551219*55121958904737829Cronobacter turicensis, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013421:478586*47858650902930444Pectobacterium wasabiae WPP163, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013592:446092*44609246819222101Dickeya dadantii Ech586, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020211:554736*55473659042335688Serratia marcescens WW4, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020064:521500*52150055828736788Serratia marcescens FGI94, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020063:4127161*4127161415360026440Enterobacteriaceae bacterium strain FGI 57, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015663:2090442*2090442212127330832Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015567:547500*54750057779630297Serratia sp. AS9 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_015566:547387*54738757761030224Serratia sp. AS12 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014500:443874*44387446959925726Dickeya dadantii 3937 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013716:3512950*3512950355955346604Citrobacter rodentium ICC168, complete genome3e-0661.9BLASTN svgBLASTP svg
CP002797:4603787*4603787464340739621Escherichia coli NA114, complete genome3e-0661.9BLASTN svgBLASTP svg