Pre_GI: BLASTN Hits

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Query: NC_011601:2139188 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 2139188, End: 2187009, Length: 47822

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010473:2119480*2119480215635336874Escherichia coli str. K-12 substr. DH10B, complete genome014420BLASTN svgBLASTP svg
NC_000913:2042935*2042935206659923665Escherichia coli K12, complete genome014420BLASTN svgBLASTP svg
AC_000091:2027648*2027648207009942452Escherichia coli W3110 DNA, complete genome014420BLASTN svgBLASTP svg
NC_009800:2083465*2083465210667323209Escherichia coli HS, complete genome014400BLASTN svgBLASTP svg
AP010958:2455052*2455052247359918548Escherichia coli O103:H2 str. 12009 DNA, complete genome010760BLASTN svgBLASTP svg
NC_010468:1816359*1816359186342947071Escherichia coli ATCC 8739, complete genome010060BLASTN svgBLASTP svg
CP002797:2062006*2062006208330121296Escherichia coli NA114, complete genome09436BLASTN svgBLASTP svg
NC_008253:20567342056734207917122438Escherichia coli 536, complete genome06972BLASTN svgBLASTP svg
NC_007946:21554542155454218077025317Escherichia coli UTI89, complete genome06972BLASTN svgBLASTP svg
NC_004431:23042802304280233659932320Escherichia coli CFT073, complete genome06972BLASTN svgBLASTP svg
NC_008253:1938975*1938975200160362629Escherichia coli 536, complete genome06502BLASTN svgBLASTP svg
NC_004431:2185750*2185750224915063401Escherichia coli CFT073, complete genome06494BLASTN svgBLASTP svg
NC_011751:23270142327014235440227389Escherichia coli UMN026 chromosome, complete genome04793BLASTN svgBLASTP svg
NC_011149:1987291*1987291203423646946Salmonella enterica subsp. enterica serovar Agona str. SL483,03820BLASTN svgBLASTP svg
CU928160:2091249*2091249211444123193Escherichia coli IAI1 chromosome, complete genome02268BLASTN svgBLASTP svg
CP002516:1902431*1902431192618823758Escherichia coli KO11, complete genome02268BLASTN svgBLASTP svg
CP002185:2181936*2181936220473822803Escherichia coli W, complete genome02268BLASTN svgBLASTP svg
NC_000913:2028472*2028472205003821567Escherichia coli K12, complete genome02260BLASTN svgBLASTP svg
NC_013716:2139952*2139952219678356832Citrobacter rodentium ICC168, complete genome01592BLASTN svgBLASTP svg
NC_011740:18318451831845185021818374Escherichia fergusonii ATCC 35469, complete genome01041BLASTN svgBLASTP svg
NC_011149:46774124677412471244835037Salmonella enterica subsp. enterica serovar Agona str. SL483,0959BLASTN svgBLASTP svg
NC_006905:4638707*4638707467273934033Salmonella enterica subsp. enterica serovar Choleraesuis str0944BLASTN svgBLASTP svg
NC_013716:1138441*1138441116841529975Citrobacter rodentium ICC168, complete genome0936BLASTN svgBLASTP svg
NC_010102:4745949*4745949476837922431Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,0932BLASTN svgBLASTP svg
NC_011080:47032664703266472876525500Salmonella enterica subsp. enterica serovar Newport str. SL254,0920BLASTN svgBLASTP svg
NC_004631:4687270*4687270471022622957Salmonella enterica subsp. enterica serovar Typhi Ty2, complete0912BLASTN svgBLASTP svg
NC_011740:1991941*1991941201386221922Escherichia fergusonii ATCC 35469, complete genome0718BLASTN svgBLASTP svg
NC_004631:948054*94805498991041857Salmonella enterica subsp. enterica serovar Typhi Ty2, complete0666BLASTN svgBLASTP svg
NC_013421:1696746*1696746172309926354Pectobacterium wasabiae WPP163, complete genome8e-144519BLASTN svgBLASTP svg
NC_004547:1873390*1873390193737663987Erwinia carotovora subsp. atroseptica SCRI1043, complete genome3e-140507BLASTN svgBLASTP svg
NC_009792:80833280833283532926998Citrobacter koseri ATCC BAA-895, complete genome7e-132480BLASTN svgBLASTP svg
NC_012880:2871480*2871480289700125522Dickeya dadantii Ech703, complete genome3e-125458BLASTN svgBLASTP svg
NC_010067:892729*89272992523832510Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete6e-123450BLASTN svgBLASTP svg
NC_004547:3207776*3207776324611038335Erwinia carotovora subsp. atroseptica SCRI1043, complete genome2e-122448BLASTN svgBLASTP svg
NC_010102:997417*997417101802320607Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,2e-113418BLASTN svgBLASTP svg
NC_013850:1753716*1753716178468730972Klebsiella variicola At-22 chromosome, complete genome2e-67266BLASTN svgBLASTP svg
NC_021066:601029*60102962413023102Raoultella ornithinolytica B6, complete genome5e-65258BLASTN svgBLASTP svg
NC_015663:4906652*4906652493024623595Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-63252BLASTN svgBLASTP svg
NC_020181:527592*52759257518147590Enterobacter aerogenes EA1509E, complete genome4e-53218BLASTN svgBLASTP svg
NC_003143:1973867*1973867199917525309Yersinia pestis CO92, complete genome4e-47198BLASTN svgBLASTP svg
NC_008149:2652825*2652825267618023356Yersinia pestis Nepal516, complete genome4e-47198BLASTN svgBLASTP svg
NC_010159:1710268*1710268173543325166Yersinia pestis Angola, complete genome4e-47198BLASTN svgBLASTP svg
NC_003143:2137945*2137945217709939155Yersinia pestis CO92, complete genome1e-46196BLASTN svgBLASTP svg
NC_004088:2640440*2640440268328342844Yersinia pestis KIM, complete genome1e-46196BLASTN svgBLASTP svg
NC_005810:1794490*1794490183441839929Yersinia pestis biovar Microtus str. 91001, complete genome1e-46196BLASTN svgBLASTP svg
NC_008150:1420825*1420825146012739303Yersinia pestis Antiqua, complete genome1e-46196BLASTN svgBLASTP svg
NC_010159:21645002164500220861544116Yersinia pestis Angola, complete genome1e-46196BLASTN svgBLASTP svg
NC_012779:12865001286500132459938100Edwardsiella ictaluri 93-146, complete genome1e-46196BLASTN svgBLASTP svg
NC_014837:2709813*2709813273364723835Pantoea sp. At-9b chromosome, complete genome1e-46196BLASTN svgBLASTP svg
NC_014837:2758239*2758239277859920361Pantoea sp. At-9b chromosome, complete genome6e-46194BLASTN svgBLASTP svg
NC_020211:3398281*3398281342338225102Serratia marcescens WW4, complete genome9e-45190BLASTN svgBLASTP svg
NC_015224:1914833*1914833193998525153Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,9e-45190BLASTN svgBLASTP svg
NC_006155:1916426*1916426195791941494Yersinia pseudotuberculosis IP 32953, complete genome4e-44188BLASTN svgBLASTP svg
NC_007712:1893066*1893066191459921534Sodalis glossinidius str. 'morsitans', complete genome4e-44188BLASTN svgBLASTP svg
NC_010634:1916000*1916000195790341904Yersinia pseudotuberculosis PB1/+, complete genome4e-44188BLASTN svgBLASTP svg
NC_012214:1650523*1650523168104730525Erwinia pyrifoliae Ep1/96, complete genome4e-44188BLASTN svgBLASTP svg
NC_013592:2968500*2968500300769039191Dickeya dadantii Ech586, complete genome4e-44188BLASTN svgBLASTP svg
NC_014562:1883517*1883517190910525589Pantoea vagans C9-1 chromosome, complete genome4e-44188BLASTN svgBLASTP svg
NC_013508:1289159*1289159133392244764Edwardsiella tarda EIB202, complete genome1e-43186BLASTN svgBLASTP svg
NC_015566:3417951*3417951345859940649Serratia sp. AS12 chromosome, complete genome6e-43184BLASTN svgBLASTP svg
NC_014500:1646854*1646854167518028327Dickeya dadantii 3937 chromosome, complete genome6e-43184BLASTN svgBLASTP svg
NC_014500:1862000*1862000191726855269Dickeya dadantii 3937 chromosome, complete genome2e-42182BLASTN svgBLASTP svg
NC_012912:2901021*2901021292518824168Dickeya zeae Ech1591, complete genome5e-40174BLASTN svgBLASTP svg
NC_014500:3097362*3097362318793090569Dickeya dadantii 3937 chromosome, complete genome8e-39170BLASTN svgBLASTP svg
NC_013592:1668092*1668092170683538744Dickeya dadantii Ech586, complete genome8e-39170BLASTN svgBLASTP svg
NC_012912:1701231*1701231174963148401Dickeya zeae Ech1591, complete genome8e-39170BLASTN svgBLASTP svg
NC_014306:3006028*3006028304213136104Erwinia billingiae Eb661, complete genome8e-36161BLASTN svgBLASTP svg
NC_008750:45023345023347009919867Shewanella sp. W3-18-1, complete genome5e-34155BLASTN svgBLASTP svg
NC_020181:42194142194144800526065Enterobacter aerogenes EA1509E, complete genome1e-31147BLASTN svgBLASTP svg
NC_011149:20403962040396206929628901Salmonella enterica subsp. enterica serovar Agona str. SL483,5e-25125BLASTN svgBLASTP svg
NC_009348:2631759*2631759265138819630Aeromonas salmonicida subsp. salmonicida A449, complete genome7e-24121BLASTN svgBLASTP svg
NC_015224:35875003587500361767930180Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,4e-22115BLASTN svgBLASTP svg
NC_013421:30939953093995311483420840Pectobacterium wasabiae WPP163, complete genome7e-21111BLASTN svgBLASTP svg
NC_011184:2421687*2421687244877527089Vibrio fischeri MJ11 chromosome I, complete sequence1e-1697.6BLASTN svgBLASTP svg
NC_005810:11302511130251115417023920Yersinia pestis biovar Microtus str. 91001, complete genome6e-1591.7BLASTN svgBLASTP svg
NC_010067:3204682*3204682322388819207Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete1e-1387.7BLASTN svgBLASTP svg
NC_014500:1066911*1066911109884731937Dickeya dadantii 3937 chromosome, complete genome4e-1385.7BLASTN svgBLASTP svg
NC_009648:38036223803622385072747106Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_019970:20804192080419209909918681Thermoanaerobacterium thermosaccharolyticum M0795, complete genome6e-1281.8BLASTN svgBLASTP svg
NC_009053:1942973*1942973197934536373Actinobacillus pleuropneumoniae L20, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_010939:1986263*1986263202856742305Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete2e-1179.8BLASTN svgBLASTP svg
NC_013592:956829*95682998781830990Dickeya dadantii Ech586, complete genome9e-1177.8BLASTN svgBLASTP svg
NC_015663:49500004950000501991769918Enterobacter aerogenes KCTC 2190 chromosome, complete genome4e-1075.8BLASTN svgBLASTP svg
NC_020211:31514583151458317575024293Serratia marcescens WW4, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_012917:569856*56985658778417929Pectobacterium carotovorum subsp. carotovorum PC1, complete genome6e-0971.9BLASTN svgBLASTP svg
NC_012880:3982383*3982383401264230260Dickeya dadantii Ech703, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009648:5119271*5119271515776838498Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_012779:36527373652737367609923363Edwardsiella ictaluri 93-146, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_015663:770485*77048579596825484Enterobacter aerogenes KCTC 2190 chromosome, complete genome9e-0867.9BLASTN svgBLASTP svg
NC_014394:707305*70730573388526581Gallionella capsiferriformans ES-2 chromosome, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_012559:85450785450789459940093Laribacter hongkongensis HLHK9, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_007298:1129889*1129889115580225914Dechloromonas aromatica RCB, complete genome4e-0765.9BLASTN svgBLASTP svg
NC_003198:4513900*4513900454590232003Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-0663.9BLASTN svgBLASTP svg
NC_003366:11226541122654114059917946Clostridium perfringens str. 13, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_005126:34853303485330350809922770Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008261:13328641332864135143618573Clostridium perfringens ATCC 13124, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_013421:16311416311418959926486Pectobacterium wasabiae WPP163, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_014538:985339985339100713721799Thermoanaerobacter sp. X513 chromosome, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_012917:1840172*1840172189159251421Pectobacterium carotovorum subsp. carotovorum PC1, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_012912:4012112*4012112403907126960Dickeya zeae Ech1591, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_012880:1711062*1711062173095119890Dickeya dadantii Ech703, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_008781:19738261973826199696823143Polaromonas naphthalenivorans CJ2, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_004431:4270305*4270305431798947685Escherichia coli CFT073, complete genome6e-0661.9BLASTN svgBLASTP svg
NC_003112:498465*49846553573337269Neisseria meningitidis MC58, complete genome6e-0661.9BLASTN svgBLASTP svg