Pre_GI: BLASTN Hits

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Query: NC_011601:149428 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 149428, End: 189913, Length: 40486

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008563:149709*14970917318423476Escherichia coli APEC O1, complete genome019090BLASTN svgBLASTP svg
NC_007946:149733*14973317320823476Escherichia coli UTI89, complete genome019090BLASTN svgBLASTP svg
NC_004431:153907*15390717771123805Escherichia coli CFT073, complete genome019000BLASTN svgBLASTP svg
NC_008253:149693*14969317261122919Escherichia coli 536, complete genome018990BLASTN svgBLASTP svg
NC_010498:153755*15375517756723813Escherichia coli SMS-3-5, complete genome017710BLASTN svgBLASTP svg
NC_011750:156799*15679917601919221Escherichia coli IAI39 chromosome, complete genome013300BLASTN svgBLASTP svg
NC_010468:3835259*3835259385816422906Escherichia coli ATCC 8739, complete genome012490BLASTN svgBLASTP svg
NC_010473:118681*11868113863819958Escherichia coli str. K-12 substr. DH10B, complete genome012320BLASTN svgBLASTP svg
NC_000913:144577*14457716459920023Escherichia coli K12, complete genome012320BLASTN svgBLASTP svg
AC_000091:144577*14457716459920023Escherichia coli W3110 DNA, complete genome012320BLASTN svgBLASTP svg
AP010958:143358*14335816609922742Escherichia coli O103:H2 str. 12009 DNA, complete genome012180BLASTN svgBLASTP svg
NC_009801:143426*14342616609922674Escherichia coli E24377A, complete genome012160BLASTN svgBLASTP svg
CU928160:145276*14527616477719502Escherichia coli IAI1 chromosome, complete genome012140BLASTN svgBLASTP svg
NC_011748:143755*14375516736523611Escherichia coli 55989, complete genome012130BLASTN svgBLASTP svg
CU928145:143755*14375516736523611Escherichia coli 55989 chromosome, complete genome012130BLASTN svgBLASTP svg
CP002185:146389*14638916862022232Escherichia coli W, complete genome012110BLASTN svgBLASTP svg
NC_011740:165363*16536318914823786Escherichia fergusonii ATCC 35469, complete genome07910BLASTN svgBLASTP svg
CP002516:3949061*3949061396781618756Escherichia coli KO11, complete genome06944BLASTN svgBLASTP svg
NC_013961:2861949*2861949288466722719Erwinia amylovora, complete genome3e-112414BLASTN svgBLASTP svg
NC_010694:96238396238398280120419Erwinia tasmaniensis, complete genome2e-85325BLASTN svgBLASTP svg
NC_015733:1680500*1680500170310522606Pseudomonas putida S16 chromosome, complete genome6e-21111BLASTN svgBLASTP svg
NC_011149:3863913*3863913388509921187Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-0869.9BLASTN svgBLASTP svg
NC_007984:22103022103024292321894Baumannia cicadellinicola str. Hc (Homalodisca coagulata), complete3e-0765.9BLASTN svgBLASTP svg
NC_009092:37323903732390375553223143Shewanella loihica PV-4, complete genome1e-0663.9BLASTN svgBLASTP svg