Pre_GI: BLASTP Hits

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Query: NC_011601:846358:858374 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 858374, End: 858601, Length: 228

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011742:2823000:282714028271402827367228Escherichia coli S88 chromosome, complete genomeDksA/TraR protein family with a zinc finger1e-27121
NC_016860:2896254:289710828971082897335228Salmonella enterica subsp. enterica serovar Typhimurium strC4-type zinc finger protein, DksA/TraR family3e-25114
NC_011205:2938356:295172829517282951955228Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853DksA/TraR family protein3e-25114
NC_003197:2870268:287354228735422873769228Salmonella typhimurium LT2, complete genomehypothetical protein3e-25114
NC_011149:2802199:281653628165362816763228Salmonella enterica subsp. enterica serovar Agona str. SL483,C4-type zinc finger protein, DksA/TraR family3e-25114
NC_006511:2677964:269189026918902692117228Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein4e-25113
NC_003198:4453457:450366745036674503894228Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein4e-25113
NC_011147:2676972:268742626874262687653228Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-25113
NC_020260:312805:321303321303321530228Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-24110
NC_009436:1466580:147985914798591480086228Enterobacter sp. 638, complete genomeTraR/DksA family transcriptional regulator1e-2098.2
NC_016810:2871689:288448528844852884712228Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage protein1e-1685.1
NC_016845:4046142:405365340536534053880228Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein7e-1682.8
NC_013282:3389619:340304934030493403273225Cronobacter turicensis, complete genomeUncharacterized 8.5 kDa protein in gpA 5'region2e-1581.3
NC_009648:3803622:383141638314163831637222Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage protein1e-1375.1
NC_009436:3807420:381093238109323811153222Enterobacter sp. 638, complete genomeTraR/DksA family transcriptional regulator1e-1272
NC_013956:3525711:354118635411863541413228Pantoea ananatis LMG 20103 chromosome, complete genomeCP802e-1270.9
NC_020181:5182568:519321951932195193440222Enterobacter aerogenes EA1509E, complete genomeHypothetical Zinc-finger containing protein3e-1167.4
NC_014837:3766426:378008137800813780308228Pantoea sp. At-9b chromosome, complete genomeTraR/DksA family transcriptional regulator1e-1065.1
NC_015061:596247:614243614243614467225Rahnella sp. Y9602 chromosome, complete genomephage/conjugal plasmid C-4 type zinc finger protein, TraR family1e-0961.6
NC_017047:4037674:404784940478494048073225Rahnella aquatilis HX2 chromosome, complete genomephage/conjugal plasmid C-4 type zinc finger protein, TraR family2e-0960.8
NC_012917:3565268:357993435799343580158225Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, TraR/DksA family3e-0960.8
NC_014837:2458780:247245224724522472676225Pantoea sp. At-9b chromosome, complete genomeTraR/DksA family transcriptional regulator1e-0858.2
NC_014306:1244721:125134012513401251567228Erwinia billingiae Eb661, complete genomehypothetical protein4e-0753.5