Pre_GI: BLASTP Hits

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Query: NC_011601:846358:856102 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 856102, End: 856671, Length: 570

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007613:761234:763483763483764052570Shigella boydii Sb227, complete genomerepressor protein8e-91332
NC_012947:2898179:290790729079072908476570Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeCI repressor1e-89328
NC_011601:846358:855128855128856051924Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-54212
NC_009436:1466580:147758714775871478183597Enterobacter sp. 638, complete genomebacteriophage CI repressor1e-53208
NC_013592:804288:821538821538822101564Dickeya dadantii Ech586, complete genomeCI repressor1e-50199
NC_014500:894136:9188619188619200541194Dickeya dadantii 3937 chromosome, complete genomeRepressor protein CI2e-50198
NC_015061:2770856:277962827796282780188561Rahnella sp. Y9602 chromosome, complete genomeCI repressor2e-44178
NC_013282:3389619:340505834050583405672615Cronobacter turicensis, complete genomePutative uncharacterized protein ORFI in retron EC672e-40165
NC_020260:312805:318993318993319607615Cronobacter sakazakii Sp291, complete genomehypothetical protein9e-38156
NC_016857:2871689:288686328868632887495633Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74phage repressor protein cI1e-37155
NC_014837:3766426:378197237819723782577606Pantoea sp. At-9b chromosome, complete genomeCI repressor2e-36151
NC_014306:1244721:124907312490731249669597Erwinia billingiae Eb661, complete genomeBacteriophage CI repressor6e-36150
NC_011742:2823000:282933728293372829969633Escherichia coli S88 chromosome, complete genomephage regulatory protein cI1e-35149
NC_016810:2871689:288692028869202887495576Salmonella enterica subsp. enterica serovar Typhimurium strbacteriophage repressor protein cI5e-34143
NC_006511:2677964:269383226938322694464633Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCphage repressor protein cI4e-33140
NC_003197:2870268:287617928761792876811633Salmonella typhimurium LT2, complete genomehypothetical protein4e-33140
NC_003198:4453457:450560945056094506241633Salmonella enterica subsp. enterica serovar Typhi str. CT18,phage repressor protein cI4e-33140
NC_011147:2676972:268936826893682690000633Salmonella enterica subsp. enterica serovar Paratyphi A strphage repressor protein cI4e-33140
NC_016860:2896254:289974528997452900377633Salmonella enterica subsp. enterica serovar Typhimurium strphage repressor protein cI4e-33140
NC_009648:3803622:383337538333753833950576Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative prophage repressor protein CI1e-29129
NC_014837:2458780:246975224697522470630879Pantoea sp. At-9b chromosome, complete genomeCI repressor2e-28125
NC_016845:4046142:405102140510214051617597Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,CI repressor1e-27122
NC_012917:3565268:357597535759753576832858Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeCI repressor5e-26117
NC_020181:5182568:519547351954735196063591Enterobacter aerogenes EA1509E, complete genomeCI2e-25115
NC_009436:3807420:381287738128773813464588Enterobacter sp. 638, complete genomebacteriophage CI repressor2e-25115
NC_006155:2116834:212296221229622123573612Yersinia pseudotuberculosis IP 32953, complete genomeCI repressor of phage 186 and others3e-25114
NC_015061:596247:611561611561612151591Rahnella sp. Y9602 chromosome, complete genomeCI repressor3e-24111
NC_020211:4598217:461422846142284614686459Serratia marcescens WW4, complete genomephage transcriptional regulator5e-22103
NC_010694:614985:629291629291629869579Erwinia tasmaniensis, complete genomeBacteriophage 186 repressor protein CI3e-1994.7
NC_009784:253852:266342266342266968627Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein7e-1580.1
NC_012125:894955:920537920537920893357Salmonella enterica subsp. enterica serovar Paratyphi C strainrepressor protein6e-1373.6
NC_010334:1561691:159000615900061590695690Shewanella halifaxensis HAW-EB4, complete genomeCI repressor6e-0960.5
NC_012912:1701231:174072917407291741118390Dickeya zeae Ech1591, complete genome6e-0960.5
NC_011080:2870428:287668328766832876970288Salmonella enterica subsp. enterica serovar Newport str. SL254,repressor protein5e-0753.9