Pre_GI: BLASTP Hits

Some Help

Query: NC_011601:4856717:4877409 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 4877409, End: 4878125, Length: 717

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007946:4875997:490351849035184904243726Escherichia coli UTI89, complete genomehypothetical protein4e-140496
NC_000913:4528278:453680845368084537524717Escherichia coli K12, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
AC_000091:4534935:454346545434654544181717Escherichia coli W3110 DNA, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
NC_009800:4529504:454378845437884544504717Escherichia coli HS, complete genomeoligogalacturonate-specific porin protein (KdgM)5e-140496
NC_011751:5070597:507814450781445078860717Escherichia coli UMN026 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
NC_011750:4978000:498624049862404986956717Escherichia coli IAI39 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
NC_002695:5381576:539369353936935394409717Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein5e-140496
NC_008258:4345400:435638343563834357099717Shigella flexneri 5 str. 8401, complete genomehypothetical protein5e-140496
AP010958:5272863:529366252936625294378717Escherichia coli O103:H2 str. 12009 DNA, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
NC_008253:4817864:484401648440164844732717Escherichia coli 536, complete genomehypothetical protein YjhA precursor5e-140496
CP002185:4791811:480122848012284801944717Escherichia coli W, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
CU928160:4570498:459942945994294600145717Escherichia coli IAI1 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
NC_010473:4630361:463861646386164639332717Escherichia coli str. K-12 substr. DH10B, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
CP002516:4199133:421092642109264211642717Escherichia coli KO11, complete genomeOligogalacturonate-specific porin5e-140496
NC_010498:4930649:494341049434104944126717Escherichia coli SMS-3-5, complete genomeN-acetylneuraminic acid porin NanC5e-140496
NC_011741:4570498:459942945994294600145717Escherichia coli IAI1 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
NC_008563:4905186:491974749197474920472726Escherichia coli APEC O1, complete genomehypothetical protein4e-140496
NC_017328:4417000:442815144281514428876726Shigella flexneri 2002017 chromosome, complete genomeputative N-acetylneuraminic acid outer membrane channel protein nanC precursor4e-140496
NC_013941:5219841:523195852319585232683726Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein4e-140496
NC_016902:4199133:421092642109264211642717Escherichia coli KO11FL chromosome, complete genomeOligogalacturonate-specific porin5e-140496
NC_016822:4889656:490050649005064901222717Shigella sonnei 53G, complete genomeOligogalacturonate-specific porin5e-140496
NC_013364:5255700:526893352689335269649717Escherichia coli O111:H- str. 11128, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
NC_013353:5272863:529366252936625294378717Escherichia coli O103:H2 str. 12009, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
NC_013008:5411285:542340254234025424118717Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
NC_012967:4510393:451892345189234519639717Escherichia coli B str. REL606 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
NC_012947:3883484:389446938944693895185717Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeoligogalacturonate-specific porin5e-140496
NC_012759:4467288:447554344755434476259717Escherichia coli BW2952 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
NC_011745:5114500:512505351250535125769717Escherichia coli ED1a chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
NC_011742:4873351:488160648816064882322717Escherichia coli S88 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein5e-140496
NC_007613:4403070:441257144125714413296726Shigella boydii Sb227, complete genomehypothetical protein2e-139494
NC_004431:5123325:513350851335085134233726Escherichia coli CFT073, complete genomeHypothetical protein yjhA precursor2e-139494
NC_013361:5580741:558730155873015588017717Escherichia coli O26:H11 str. 11368 chromosome, complete genomeN-acetylnuraminic acid outer membrane channel protein2e-139494
NC_009801:4882684:490101449010144901730717Escherichia coli E24377A, complete genomeoligogalacturonate-specific porin protein (KdgM)2e-138491
CP002797:4656327:466828746682874668835549Escherichia coli NA114, complete genomeN-acetylneuraminic acid outer membrane channel protein NanC3e-105380
NC_004741:4364235:437697943769794377527549Shigella flexneri 2a str. 2457T, complete genomehypothetical protein3e-105380
NC_004337:4374500:438588343858834386431549Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-105380
NC_011353:5455224:546734154673415467889549Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeoligogalacturonate-specific porin protein3e-105380
NC_011745:4862218:487319248731924873932741Escherichia coli ED1a chromosome, complete genomeputative N-acetylneuraminic acid outer membrane channel protein nanC1e-81302
NC_004431:3409389:347458534745853475325741Escherichia coli CFT073, complete genomeHypothetical protein yjhA precursor1e-81302
NC_011751:3453683:349769234976923498432741Escherichia coli UMN026 chromosome, complete genomeputative N-acetylneuraminic acid outer membrane channel protein nanC1e-81302
NC_009792:1345500:135474313547431355540798Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein7e-45180
NC_015761:2982000:300626230062623007170909Salmonella bongori NCTC 12419, complete genomemembrane permease7e-1787.4
NC_020063:4653422:467165046716504672348699Enterobacteriaceae bacterium strain FGI 57, complete genomeouter membrane protein (porin)8e-1684
NC_013282:3216226:322811032281103228895786Cronobacter turicensis, complete genomehypothetical protein2e-1582.8
NC_010102:1979742:198669119866911987383693Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1272.4
NC_016831:1905289:191693819169381917630693Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein4e-1271.6
NC_011080:1209935:122300612230061223698693Salmonella enterica subsp. enterica serovar Newport str. SL254,oligogalacturonate-specific porin4e-1271.6
NC_011083:1216500:122538212253821226074693Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,oligogalacturonate-specific porin4e-1271.6
NC_006905:1186895:119996511999651200657693Salmonella enterica subsp. enterica serovar Choleraesuis strputative outer membrane protein4e-1271.6
NC_003197:1207597:122066612206661221358693Salmonella typhimurium LT2, complete genomeputative outer membrane protein4e-1271.6
NC_006511:1770000:177696617769661777658693Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative secreted protein4e-1271.6
NC_011147:1763681:177214917721491772841693Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein4e-1271.6
NC_011274:1094379:110744311074431108135693Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein4e-1271.6
NC_016810:1163919:117698911769891177681693Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-1271.6
NC_016856:1165941:117901111790111179703693Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative outer membrane protein4e-1271.6
NC_016857:1163919:117698911769891177681693Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative outer membrane protein4e-1271.6
NC_016860:1205282:121835212183521219044693Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-1271.6
NC_016863:1165232:117830211783021178994693Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative outer membrane protein4e-1271.6
NC_017046:1164176:117724611772461177938693Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-1271.6
NC_003198:1117687:113075411307541131446693Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative secreted protein9e-1270.5
NC_004631:1842050:184936718493671850059693Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative secreted protein9e-1270.5
NC_016832:1838220:184621718462171846909693Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Oligogalacturonate-specific porin9e-1270.5
NC_011294:1085447:109853010985301099222693Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein9e-1270.5
NC_011205:1186097:119916011991601199852693Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853oligogalacturonate-specific porin2e-1169.3
NC_010067:1782998:179103217910321791724693Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-1169.3
NC_011094:1166271:117934111793411180033693Salmonella enterica subsp. enterica serovar Schwarzengrund stroligogalacturonate-specific porin4e-1168.2
NC_020418:1397112:141511014151101415799690Morganella morganii subsp. morganii KT, complete genomeN-acetylneuraminic acid outer membrane channel protein NanC3e-1065.5
NC_011080:4177443:418418441841844184876693Salmonella enterica subsp. enterica serovar Newport str. SL254,porin OmpL7e-0960.8
NC_013421:2720500:272238727223872723151765Pectobacterium wasabiae WPP163, complete genomeOligogalacturonate-specific porin2e-0756.2
NC_012880:2399205:241863924186392419352714Dickeya dadantii Ech703, complete genomeOligogalacturonate-specific porin1e-0653.5
NC_009436:522649:548020548020548721702Enterobacter sp. 638, complete genomeoligogalacturonate-specific porin2e-0653.1