Pre_GI: BLASTP Hits

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Query: NC_011601:4096427:4123351 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 4123351, End: 4123647, Length: 297

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:3669500:369948836994883699784297Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspZ1e-1684.7
AP010958:3669500:369948836994883699784297Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector EspZ1e-1684.7
NC_013364:3701895:374099037409903741286297Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector EspZ1e-1684.7
NC_013941:4470932:449708444970844497383300Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeSepZ4e-1167
NC_013008:4643825:466872546687254669024300Escherichia coli O157:H7 str. TW14359 chromosome, complete genometranslocated effector protein4e-1167
NC_002695:4584177:460958046095804609879300Escherichia coli O157:H7 str. Sakai, complete genomeSepZ4e-1167
NC_002655:4653160:467856346785634678862300Escherichia coli O157:H7 EDL933, complete genomesepZ4e-1167
NC_013361:5319497:534409653440965344398303Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector EspZ2e-1064.7