Pre_GI: BLASTP Hits

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Query: NC_011601:4036590:4051527 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 4051527, End: 4052324, Length: 798

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012947:94930:100127100127100924798Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completelipopolysaccharide kinase1e-133476
NC_004431:4223232:423615642361564236962807Escherichia coli CFT073, complete genomeLipopolysaccharide core biosynthesis protein rfaP1e-133475
NC_012967:3729813:374351337435133744319807Escherichia coli B str. REL606 chromosome, complete genomekinase that phosphorylates core heptose of lipopolysaccharide1e-133475
NC_011751:4251296:426443642644364265242807Escherichia coli UMN026 chromosome, complete genomekinase that phosphorylates core heptose of lipopolysaccharide1e-133475
NC_007606:3784847:379742737974273798233807Shigella dysenteriae Sd197, complete genomeputative LPS biosynthesis enzyme3e-133474
CU928160:3862935:387585038758503876656807Escherichia coli IAI1 chromosome, complete genomekinase that phosphorylates core heptose of lipopolysaccharide3e-133474
NC_011741:3862935:387585038758503876656807Escherichia coli IAI1 chromosome, complete genomekinase that phosphorylates core heptose of lipopolysaccharide3e-133474
NC_009800:3821824:383473938347393835536798Escherichia coli HS, complete genomelipopolysaccharide core biosynthesis protein RfaP2e-133474
NC_009801:4108179:412109441210944121891798Escherichia coli E24377A, complete genomelipopolysaccharide core biosynthesis protein RfaP2e-133474
CP002516:88500:942499424995046798Escherichia coli KO11, complete genomeputative LPS biosynthesis enzyme2e-133474
CP002185:3998112:401102740110274011824798Escherichia coli W, complete genomekinase that phosphorylates core heptose of lipopolysaccharide2e-133474
NC_010468:80000:858208582086617798Escherichia coli ATCC 8739, complete genomelipopolysaccharide kinase2e-133474
NC_016902:88500:942499424995046798Escherichia coli KO11FL chromosome, complete genomeputative LPS biosynthesis enzyme2e-133474
NC_010658:3774110:378798037879803788777798Shigella boydii CDC 3083-94, complete genomelipopolysaccharide core biosynthesis protein RfaP8e-133473
NC_007613:3637832:365075636507563651553798Shigella boydii Sb227, complete genomeRfaP8e-133473
NC_008563:4083558:409648240964824097288807Escherichia coli APEC O1, complete genomelipopolysaccharide core biosynthesis protein RfaP8e-133473
NC_007946:4050762:406368640636864064492807Escherichia coli UTI89, complete genomelipopolysaccharide core biosynthesis protein rfaP8e-133473
NC_011742:3998285:401120940112094012015807Escherichia coli S88 chromosome, complete genomekinase that phosphorylates core heptose of lipopolysaccharide8e-133473
NC_011745:4226186:423932242393224240128807Escherichia coli ED1a chromosome, complete genomekinase that phosphorylates core heptose of lipopolysaccharide6e-133473
NC_002655:4606000:461800046180004618806807Escherichia coli O157:H7 EDL933, complete genomeputative LPS biosynthesis enzyme1e-132472
NC_013941:4427000:443896244389624439768807Escherichia coli O55:H7 str. CB9615 chromosome, complete genomelipopolysaccharide core biosynthesis protein RfaP1e-132472
NC_002695:4537000:454901745490174549814798Escherichia coli O157:H7 str. Sakai, complete genomeRfaP1e-132472
NC_011353:4639002:465212146521214652918798Escherichia coli O157:H7 str. EC4115 chromosome, complete genomelipopolysaccharide core biosynthesis protein RfaP1e-132472
NC_013008:4595043:460816246081624608959798Escherichia coli O157:H7 str. TW14359 chromosome, complete genomekinase that phosphorylates core heptose of lipopolysaccharide1e-132472
NC_013361:4991020:499762449976244998421798Escherichia coli O26:H11 str. 11368 chromosome, complete genomelipopolysaccharide core biosynthesis protein FfaP1e-132472
NC_013364:4460500:447255944725594473356798Escherichia coli O111:H- str. 11128, complete genomelipopolysaccharide core biosynthesis protein FfaP1e-132472
NC_004337:3761865:377465637746563775462807Shigella flexneri 2a str. 301, complete genomelipopolysaccharide core biosynthesis protein2e-132471
NC_004337:3590323:377465637746563775462807Shigella flexneri 2a str. 301, complete genomelipopolysaccharide core biosynthesis protein2e-132471
NC_004741:3992384:399975539997554000561807Shigella flexneri 2a str. 2457T, complete genomelipopolysaccharide core biosynthesis protein2e-132471
NC_017328:3794105:380689638068963807702807Shigella flexneri 2002017 chromosome, complete genomeLipopolysaccharide core biosynthesis protein2e-132471
NC_011750:4307166:432007843200784320884807Escherichia coli IAI39 chromosome, complete genomekinase that phosphorylates core heptose of lipopolysaccharide2e-132471
NC_008258:3995553:400289440028944003691798Shigella flexneri 5 str. 8401, complete genomelipopolysaccharide core biosynthesis protein2e-132471
NC_007384:3956465:396192739619273962724798Shigella sonnei Ss046, complete genomelipopolysaccharide core biosynthesis protein2e-132471
NC_016822:4093000:409878740987874099584798Shigella sonnei 53G, complete genomelipopolysaccharide core heptose(I) kinase RfaP2e-132471
AP010958:4668181:467478546747854675582798Escherichia coli O103:H2 str. 12009 DNA, complete genomelipopolysaccharide core biosynthesis protein FfaP2e-132471
NC_013353:4668181:467478546747854675582798Escherichia coli O103:H2 str. 12009, complete genomelipopolysaccharide core biosynthesis protein FfaP2e-132471
NC_008253:3896704:390962839096283910425798Escherichia coli 536, complete genomelipopolysaccharide core biosynthesis protein WaaP2e-132471
NC_010498:4031500:404317940431794043976798Escherichia coli SMS-3-5, complete genomelipopolysaccharide core biosynthesis protein RfaP5e-132470
NC_011748:4167043:418018041801804180986807Escherichia coli 55989, complete genomekinase that phosphorylates core heptose of lipopolysaccharide4e-132470
CU928145:4167043:418018041801804180986807Escherichia coli 55989 chromosome, complete genomekinase that phosphorylates core heptose of lipopolysaccharide4e-132470
NC_011415:4040211:405334840533484054154807Escherichia coli SE11 chromosome, complete genomelipopolysaccharide core biosynthesis protein4e-132470
NC_012759:3675396:369150236915023692299798Escherichia coli BW2952 chromosome, complete genomekinase that phosphorylates core heptose of lipopolysaccharide7e-131466
AC_000091:3827856:383446538344653835262798Escherichia coli W3110 DNA, complete genomekinase that phosphorylates core heptose of lipopolysaccharide7e-131466
NC_010473:3883701:390075339007533901550798Escherichia coli str. K-12 substr. DH10B, complete genomekinase that phosphorylates core heptose of lipopolysaccharide7e-131466
NC_000913:3786124:380317638031763803973798Escherichia coli K12, complete genomekinase that phosphorylates core heptose of lipopolysaccharide7e-131466
NC_011740:4007000:402186440218644022661798Escherichia fergusonii ATCC 35469, complete genomekinase that phosphorylates core heptose of lipopolysaccharide8e-125446
NC_013716:4408201:441491744149174415714798Citrobacter rodentium ICC168, complete genomeheptosyl-I-kinase2e-119428
NC_020063:97436:102737102737103534798Enterobacteriaceae bacterium strain FGI 57, complete genomeLipopolysaccharide kinase (Kdo/WaaP) family4e-119427
NC_010067:3846962:385241738524173853214798Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-118424
NC_011080:3875320:388910038891003889897798Salmonella enterica subsp. enterica serovar Newport str. SL254,lipopolysaccharide core biosynthesis protein2e-118424
NC_011205:3942500:395564939556493956446798Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853lipopolysaccharide core biosynthesis protein2e-118424
NC_011274:3894387:390098739009873901784798Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91lipopolysaccharide core biosynthesis protein2e-118424
NC_011294:3782655:379705237970523797849798Salmonella enterica subsp. enterica serovar Enteritidis strlipopolysaccharide core biosynthesis protein2e-118424
NC_016831:3875134:388173438817343882531798Salmonella enterica subsp. enterica serovar Gallinarum/pullorumlipopolysaccharide core biosynthesis protein2e-118424
NC_006905:3845000:385824938582493859046798Salmonella enterica subsp. enterica serovar Choleraesuis strlipopolysaccharide core biosynthesis; phosphorylation of core heptose5e-118423
NC_003197:3902500:391594839159483916745798Salmonella typhimurium LT2, complete genomelipopolysaccharide core biosynthetic protein5e-118423
NC_011083:3915500:392895839289583929755798Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,lipopolysaccharide core biosynthesis protein RfaP5e-118423
NC_010102:3851500:386489538648953865692798Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein5e-118423
NC_016810:3923988:393726239372623938059798Salmonella enterica subsp. enterica serovar Typhimurium strlipopolysaccharide core biosynthesis protein5e-118423
NC_016856:3916500:392964039296403930437798Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Slipopolysaccharide core biosynthetic protein5e-118423
NC_016857:3924000:393726339372633938060798Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74lipopolysaccharide core biosynthetic protein5e-118423
NC_016860:3925500:393884439388443939641798Salmonella enterica subsp. enterica serovar Typhimurium strlipopolysaccharide core biosynthesis protein RfaP5e-118423
NC_016863:3864000:387724738772473878044798Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1lipopolysaccharide core biosynthetic protein5e-118423
NC_017046:3923000:393608939360893936886798Salmonella enterica subsp. enterica serovar Typhimurium str. 798lipopolysaccharide core biosynthesis protein5e-118423
NC_012125:3840000:385310338531033853900798Salmonella enterica subsp. enterica serovar Paratyphi C strainlipopolysaccharide core biosynthesis protein9e-118422
NC_011149:3822000:383531538353153836112798Salmonella enterica subsp. enterica serovar Agona str. SL483,lipopolysaccharide core biosynthesis protein RfaP9e-118422
NC_006511:3690828:370460737046073705404798Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCClipopolysaccharide core biosynthesis protein9e-118422
NC_011147:3686500:370028437002843701081798Salmonella enterica subsp. enterica serovar Paratyphi A strlipopolysaccharide core biosynthesis protein9e-118422
NC_015761:3611993:362577436257743626571798Salmonella bongori NCTC 12419, complete genomelipopolysaccharide core biosynthesis protein8e-118422
NC_003198:3924952:393155239315523932349798Salmonella enterica subsp. enterica serovar Typhi str. CT18,lipopolysaccharide core biosynthesis protein4e-117421
NC_004631:3910451:391705139170513917848798Salmonella enterica subsp. enterica serovar Typhi Ty2, completelipopolysaccharide core biosynthesis protein4e-117421
NC_016832:3900000:390584839058483906645798Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Lipopolysaccharide core heptose(I) kinase rfaP4e-117421
NC_011094:3778000:379203437920343792831798Salmonella enterica subsp. enterica serovar Schwarzengrund strlipopolysaccharide core biosynthesis protein RfaP2e-117421
NC_009792:4658909:467147346714734672270798Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein5e-95347
NC_015740:4072415:408920040892004090006807Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completelipopolysaccharide core biosynthesis protein WaaP4e-75281
NC_009439:637193:640382640382641179798Pseudomonas mendocina ymp, complete genomelipopolysaccharide kinase2e-74279
NC_013889:325118:339403339403340266864Thioalkalivibrio sp. K90mix chromosome, complete genomelipopolysaccharide kinase4e-44178
NC_007498:1491223:149589314958931496729837Pelobacter carbinolicus DSM 2380, complete genomelipopolysaccharide core biosynthesis protein1e-36153