Pre_GI: BLASTP Hits

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Query: NC_011601:3338888:3351316 Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome

Start: 3351316, End: 3351990, Length: 675

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Enteropathogenic Escherichia coli (EPEC) is an important cause of fatal infant diarrhea. EPEC induces diarrhea by attaching and effacing to host cells in the small intestine, inducing cytoskeletal rearrangements that result in pedastel formation, and then by introducing toxins into the host cell. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:3676146:368856636885663689240675Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeST47 protein3e-129460
AP010958:3627355:363977336397733640447675Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleE-like protein3e-129460
NC_002655:3919545:393196539319653932639675Escherichia coli O157:H7 EDL933, complete genomehypothetical protein3e-129460
AP010958:5090696:510659351065935107267675Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector NleE-like protein3e-129460
NC_002695:3852233:386465238646523865326675Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-129460
NC_011353:3956630:396904939690493969723675Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeNleE3e-129460
NC_013008:3911356:392377539237753924449675Escherichia coli O157:H7 str. TW14359 chromosome, complete genomenon-LEE-encoded type III effector3e-129460
NC_013353:3627355:363977336397733640447675Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleE3e-129460
NC_013353:5090696:510659351065935107267675Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector NleE-like protein3e-129460
NC_013364:5083949:509920750992075099881675Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleE-like protein3e-129460
NC_013364:3701895:371376537137653714439675Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector NleE9e-129459
NC_013716:1178383:119164311916431192335693Citrobacter rodentium ICC168, complete genomeT3SS effector protein NleE7e-113406
NC_017319:192482:219891219891220475585Shigella flexneri 2002017 plasmid pSFxv_1, complete sequencehypothetical protein1e-80299
NC_011601:1114104:113820311382031138709507Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS secreted effector NleE-like protein with internal deletion of 56 aa4e-72271
NC_017319:192482:219764219764219919156Shigella flexneri 2002017 plasmid pSFxv_1, complete sequencehypothetical protein6e-0857.8