Pre_GI: BLASTN Hits

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Query: NC_011593:53044 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 53044, End: 71386, Length: 18343

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015067:32500325005709924600Bifidobacterium longum subsp. longum JCM 1217, complete genome011330BLASTN svgBLASTP svg
NC_008618:10915*109153564524731Bifidobacterium adolescentis ATCC 15703, complete genome04333BLASTN svgBLASTP svg
NC_008618:17297391729739176070830970Bifidobacterium adolescentis ATCC 15703, complete genome8e-37163BLASTN svgBLASTP svg
NC_010407:20384992038499205674718249Clavibacter michiganensis subsp. sepedonicus chromosome, complete1e-20109BLASTN svgBLASTP svg
NC_015067:998500998500102062722128Bifidobacterium longum subsp. longum JCM 1217, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_014837:23542412354241238131727077Pantoea sp. At-9b chromosome, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_010465:62348*6234810809945752Yersinia pseudotuberculosis YPIII, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_013406:38741573874157389565621500Paenibacillus sp. Y412MC10 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_009832:16642381664238169623231995Serratia proteamaculans 568, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_010508:1206498*1206498122498518488Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence5e-0763.9BLASTN svgBLASTP svg
NC_010087:46059146059149073730147Burkholderia multivorans ATCC 17616 chromosome 3, complete2e-0661.9BLASTN svgBLASTP svg
NC_010087:31906331906336759948537Burkholderia multivorans ATCC 17616 chromosome 3, complete2e-0661.9BLASTN svgBLASTP svg
NC_020064:15014411501441151984318403Serratia marcescens FGI94, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015052:47194447194450736635423Bifidobacterium longum subsp. infantis 157F, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010801:55027055027059663446365Burkholderia multivorans ATCC 17616 chromosome 3, complete2e-0661.9BLASTN svgBLASTP svg
NC_013850:2103469*2103469214696843500Klebsiella variicola At-22 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_012559:10648211064821109367428854Laribacter hongkongensis HLHK9, complete genome9e-0660BLASTN svgBLASTP svg
NC_010681:12029291202929122652623598Burkholderia phytofirmans PsJN chromosome 1, complete sequence9e-0660BLASTN svgBLASTP svg