Pre_GI: BLASTN Hits

Some Help

Query: NC_011593:2504671 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 2504671, End: 2529194, Length: 24524

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008340:480399*48039950429523897Alkalilimnicola ehrlichei MLHE-1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014318:7480669*7480669750464523977Amycolatopsis mediterranei U32 chromosome, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_013171:228356*22835625488926534Anaerococcus prevotii DSM 20548, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013171:1420135*1420135144484824714Anaerococcus prevotii DSM 20548, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014550:2091797*2091797212997638180Arthrobacter arilaitensis Re117, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009937:958576*95857698323924664Azorhizobium caulinodans ORS 571, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_020300:646500*64650066871022211Bartonella australis Aust/NH1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014932:985882*985882103391148030Bartonella clarridgeiae 73, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012846:825341*82534184359918259Bartonella grahamii as4aup, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005956:699206*69920672190722702Bartonella henselae str. Houston-1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005955:841781*84178186085019070Bartonella quintana str. Toulouse, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020301:669000*66900071117642177Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_018720:18120001812000183689224893Bifidobacterium asteroides PRL2011 chromosome, complete genome6e-177628BLASTN svgBLASTP svg
NC_010816:1989868*1989868201173521868Bifidobacterium longum DJO10A, complete genome06276BLASTN svgBLASTP svg
NC_010816:1274702*1274702129873624035Bifidobacterium longum DJO10A, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_004307:11083251108325114340935085Bifidobacterium longum NCC2705, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_004307:1936725*1936725195890722183Bifidobacterium longum NCC2705, complete genome05721BLASTN svgBLASTP svg
NC_004307:57972957972960914329415Bifidobacterium longum NCC2705, complete genome3e-18101BLASTN svgBLASTP svg
NC_015052:47194447194450736635423Bifidobacterium longum subsp. infantis 157F, complete genome5e-20107BLASTN svgBLASTP svg
NC_015052:1569255*1569255159297923725Bifidobacterium longum subsp. infantis 157F, complete genome0680BLASTN svgBLASTP svg
NC_015052:2071759*2071759209363321875Bifidobacterium longum subsp. infantis 157F, complete genome06371BLASTN svgBLASTP svg
NC_015067:2032271*2032271205409921829Bifidobacterium longum subsp. longum JCM 1217, complete genome06340BLASTN svgBLASTP svg
NC_015067:32500325005709924600Bifidobacterium longum subsp. longum JCM 1217, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_015067:21360482136048216896932922Bifidobacterium longum subsp. longum JCM 1217, complete genome9e-22113BLASTN svgBLASTP svg
NC_013131:8480384*8480384852686646483Catenulispora acidiphila DSM 44928, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_014151:30488*304886009929612Cellulomonas flavigena DSM 20109 chromosome, complete genome5e-79303BLASTN svgBLASTP svg
NC_015671:2371632*2371632239461522984Cellvibrio gilvus ATCC 13127 chromosome, complete genome2e-19105BLASTN svgBLASTP svg
NC_021182:93000*9300014465551656Clostridium pasteurianum BC1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010376:606000*60600062469418695Finegoldia magna ATCC 29328, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_013721:1397246*1397246142235425109Gardnerella vaginalis 409-05, complete genome2e-22115BLASTN svgBLASTP svg
NC_008789:942309*94230996834126033Halorhodospira halophila SL1, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009004:25988259884846022473Lactococcus lactis subsp. cremoris MG1363, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006087:88576088576091259926840Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007626:3393940*3393940344229748358Magnetospirillum magneticum AMB-1, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010397:43875004387500440592818429Mycobacterium abscessus chromosome Chromosome, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_010612:68154468154470456323020Mycobacterium marinum M, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014814:48344448344450236518922Mycobacterium sp. Spyr1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013960:2440453*2440453245844817996Nitrosococcus halophilus Nc4 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_006361:4098469*4098469414791249444Nocardia farcinica IFM 10152, complete genome3e-40174BLASTN svgBLASTP svg
NC_014210:53708685370868538907818211Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,1e-1489.7BLASTN svgBLASTP svg
NC_010793:1075388*1075388110374328356Orientia tsutsugamushi str. Ikeda, complete genome1e-1799.6BLASTN svgBLASTP svg
NC_015259:1803266*1803266182644223177Polymorphum gilvum SL003B-26A1 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_015458:3077804*3077804310090323100Pusillimonas sp. T7-7 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012587:1203103*1203103122551622414Rhizobium sp. NGR234, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014659:4299552*4299552434331043759Rhodococcus equi 103S, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012522:58959465895946592393127986Rhodococcus opacus B4, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013159:1225866*1225866124823622371Saccharomonospora viridis DSM 43017, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_019673:1420198*1420198144786527668Saccharothrix espanaensis DSM 44229 complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014168:2575799*2575799261011334315Segniliparus rotundus DSM 44985 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015437:2164997*2164997218559920603Selenomonas sputigena ATCC 35185 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003888:2814360*2814360285868544326Streptomyces coelicolor A3(2), complete genome2e-1385.7BLASTN svgBLASTP svg
NC_021177:2451000*2451000247327922280Streptomyces fulvissimus DSM 40593, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015953:5444572*5444572547270028129Streptomyces sp. SirexAA-E chromosome, complete genome2e-56228BLASTN svgBLASTP svg
NC_018750:5828000*5828000585027722278Streptomyces venezuelae ATCC 10712, complete genome4e-70274BLASTN svgBLASTP svg
NC_014220:2037560*2037560205760220043Syntrophothermus lipocalidus DSM 12680 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_018870:2479114*2479114250064221529Thermacetogenium phaeum DSM 12270 chromosome, complete genome3e-18101BLASTN svgBLASTP svg
NC_014964:1695000*1695000172192326924Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, complete8e-1383.8BLASTN svgBLASTP svg
NC_014165:2928464*2928464295012221659Thermobispora bispora DSM 43833 chromosome, complete genome8e-19103BLASTN svgBLASTP svg
NC_014158:14793131479313150261123299Tsukamurella paurometabola DSM 20162 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg