Pre_GI: BLASTP Hits

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Query: NC_011593:580318:584157 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 584157, End: 584882, Length: 726

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017219:580093:583950583950584675726Bifidobacterium longum subsp. infantis ATCC 15697, complete genometranscriptional regulator2e-138491
NC_015052:1771976:1794851179485117958611011Bifidobacterium longum subsp. infantis 157F, complete genometranscriptional regulator5e-50197
NC_014169:1784435:1808637180863718096471011Bifidobacterium longum subsp. longum JDM301 chromosome, completeregulatory protein LacI3e-49195
NC_008618:1456000:1476252147625214773311080Bifidobacterium adolescentis ATCC 15703, complete genomeLacI-type transcriptional regulator7e-45180
NC_013714:1830959:1855634185563418566471014Bifidobacterium dentium Bd1, complete genomeTranscriptional regulator, LacI family1e-42173
NC_010610:908452:9203809203809213811002Lactobacillus fermentum IFO 3956, complete genometranscriptional regulator1e-23110
NC_016593:956839:964635964635965633999Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeHTH-type transcriptional regulator ganR4e-23108
NC_015977:2309873:232989323298932330876984Roseburia hominis A2-183 chromosome, complete genomeLacI family transcription regulator3e-1892.4
NC_006322:1119471:1144778114477811458211044Bacillus licheniformis ATCC 14580, complete genomeMsmR2e-1583.2
NC_006270:1119000:1143930114393011449671038Bacillus licheniformis ATCC 14580, complete genometranscriptional regulator MsmR2e-1583.2
NC_017138:2293576:2293576229357622946101035Bacillus megaterium WSH-002 chromosome, complete genomeHTH-type transcriptional regulator msmR1e-1583.2
NC_013656:2317224:2329585232958523306221038Lactococcus lactis subsp. lactis KF147, complete genomeLacI family transcriptional regulator1e-1376.6
NC_013353:3853082:389709238970923898075984Escherichia coli O103:H2 str. 12009, complete genomeDNA-binding transcriptional repressor EbgR1e-1273.2
AP010958:3853082:389709238970923898075984Escherichia coli O103:H2 str. 12009 DNA, complete genomeDNA-binding transcriptional repressor EbgR1e-1273.2
NC_020291:902635:9065689065689075751008Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genometranscriptional regulator, LacI family5e-1271.6
NC_013714:1830959:1850724185072418521781455Bifidobacterium dentium Bd1, complete genomeLacS Galactoside symporter1e-1170.5
NC_013205:854983:8649288649288659501023Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, LacI family1e-1169.7
NC_008618:1456000:1474510147451014759821473Bifidobacterium adolescentis ATCC 15703, complete genomegalactoside symporter5e-1168.2
NC_016613:2759908:276559427655942766586993Vibrio sp. EJY3 chromosome 1, complete sequenceDNA-binding transcriptional repressor EbgR9e-1167.4
NC_013192:618936:6445366445366455371002Leptotrichia buccalis DSM 1135, complete genometranscriptional regulator, LacI family7e-1064.3
NC_013205:2922343:2930099293009929311271029Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,transcriptional regulator, LacI family5e-0961.6
NC_012917:833721:8628718628718639021032Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, LacI family5e-0961.6
NC_017167:3013947:3021352302135230223801029Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1LacI family transcriptional regulator5e-0961.6
NC_014206:2971304:2993247299324729942661020Geobacillus sp. C56-T3 chromosome, complete genomeLacI family transcriptional regulator1e-0860.1
NC_010610:2013659:2043875204387520448761002Lactobacillus fermentum IFO 3956, complete genomegalactose operon repressor2e-0859.7
NC_014652:325109:3285693285693295911023Caldicellulosiruptor hydrothermalis 108 chromosome, completetranscriptional regulator, laci family3e-0858.9
NC_008593:1797000:181450218145021815500999Clostridium novyi NT, complete genomeCatabolite control protein A8e-0857.4
NC_009437:475817:4792774792774802991023Caldicellulosiruptor saccharolyticus DSM 8903, complete genomealanine racemase8e-0857.4
NC_014657:2283176:2300468230046823014901023Caldicellulosiruptor owensensis OL chromosome, complete genometranscriptional regulator, laci family9e-0857.4
NC_014364:815346:8724528724528734651014Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, LacI family2e-0755.8
NC_015949:2327500:2344130234413023451431014Caldicellulosiruptor lactoaceticus 6A chromosome, complete genomeLacI family transcriptional regulator3e-0755.5
NC_012034:2676943:2711258271125827122801023Anaerocellum thermophilum DSM 6725, complete genometranscriptional regulator, LacI family3e-0755.5
NC_014721:135982:1376111376111386241014Caldicellulosiruptor kristjanssonii 177R1B chromosome, completetranscriptional regulator, laci family3e-0755.5
NC_014720:383587:3870573870573880791023Caldicellulosiruptor kronotskyensis 2002 chromosome, completetranscriptional regulator, laci family3e-0755.5
NC_019897:938921:9497709497709507831014Thermobacillus composti KWC4 chromosome, complete genometranscriptional regulator3e-0755.5
NC_011899:1926000:1946127194612719472871161Halothermothrix orenii H 168, complete genometranscriptional regulator, LacI family5e-0755.1
NC_012034:390273:391645391645392628984Anaerocellum thermophilum DSM 6725, complete genometranscriptional regulator, LacI family7e-0754.3
NC_014392:355443:356785356785357768984Caldicellulosiruptor obsidiansis OB47 chromosome, complete genometranscriptional regulator, LacI family8e-0754.3
NC_010674:3049500:3060615306061530616341020Clostridium botulinum B str. Eklund 17B, complete genometranscriptional regulator1e-0653.9
NC_014392:2350577:2368548236854823695701023Caldicellulosiruptor obsidiansis OB47 chromosome, complete genometranscriptional regulator, LacI family1e-0653.9
NC_010610:908452:9160549160549180241971Lactobacillus fermentum IFO 3956, complete genomelactose transport protein1e-0653.5
NC_003888:3817000:3849177384917738502261050Streptomyces coelicolor A3(2), complete genomelacI-family transcriptional regulator1e-0653.5
NC_014328:180482:190314190314191312999Clostridium ljungdahlii ATCC 49587 chromosome, complete genometranscriptional regulator2e-0653.1
NC_017079:1084684:1098869109886910998821014Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomeputative LacI family transcriptional regulator2e-0653.1
NC_015224:1703130:1723843172384317248801038Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,DNA-binding transcriptional regulator GalS2e-0652.8
NC_013411:681907:686115686115687107993Geobacillus sp. Y412MC61, complete genomeglobal transcriptional regulator, catabolite control protein A2e-0652.8
NC_014915:2900209:291682829168282917820993Geobacillus sp. Y412MC52 chromosome, complete genomeglobal transcriptional regulator, catabolite control protein A2e-0652.8
NC_017167:1088713:1114180111418011151931014Alicyclobacillus acidocaldarius subsp. acidocaldarius Tc-4-1purine operon repressor, PurR2e-0652.8
NC_016612:361417:3653263653263663361011Klebsiella oxytoca KCTC 1686 chromosome, complete genomesugar binding transcriptional regulator, LacI family protein2e-0652.8
NC_011661:409943:4117784117784128061029Dictyoglomus turgidum DSM 6724, complete genometranscriptional regulator, LacI family3e-0652.4
NC_011297:290737:2950522950522960801029Dictyoglomus thermophilum H-6-12, complete genometranscriptional regulator3e-0652.4
NC_012912:242709:258624258624259622999Dickeya zeae Ech1591, complete genometranscriptional regulator, LacI family3e-0652.4
NC_020064:3998715:4083640408364040846591020Serratia marcescens FGI94, complete genometranscriptional regulator4e-0652
NC_010520:121077:125424125424126422999Clostridium botulinum A3 str. Loch Maree, complete genometranscriptional regulator, LacI family4e-0652
NC_012658:125500:129141129141130139999Clostridium botulinum Ba4 str. 657 chromosome, complete genomeLacI family transcriptional regulator4e-0652
NC_015875:1926981:1945650194565019466601011Streptococcus pseudopneumoniae IS7493 chromosome, complete genomecatabolite control protein A4e-0652
NC_012563:122000:125597125597126595999Clostridium botulinum A2 str. Kyoto, complete genometranscriptional regulator, LacI family4e-0652
NC_009495:128000:131661131661132659999Clostridium botulinum A str. ATCC 3502 chromosome, complete genomeLacI family transcriptional regulator4e-0652
NC_009697:120117:124464124464125462999Clostridium botulinum A str. ATCC 19397 chromosome, completeLacI family transcriptional regulator4e-0652
NC_009698:120119:124466124466125464999Clostridium botulinum A str. Hall chromosome, complete genomeLacI family transcriptional regulator4e-0652
NC_017297:122383:126729126729127727999Clostridium botulinum F str. 230613 chromosome, complete genomeLacI family transcriptional regulator4e-0651.6
NC_009699:122000:126464126464127462999Clostridium botulinum F str. Langeland chromosome, complete genomeLacI family transcriptional regulator4e-0651.6
NC_019978:2506472:2508740250874025097441005Halobacteroides halobius DSM 5150, complete genometranscriptional regulator4e-0651.6
NC_015588:2037726:2046464204646420474741011Isoptericola variabilis 225 chromosome, complete genometranscriptional regulator, LacI family1e-0550.4