Pre_GI: BLASTP Hits

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Query: NC_011593:333488:361304 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 361304, End: 361597, Length: 294

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017219:333279:361092361092361388297Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeATP synthase subunit epsilon8e-51198
NC_013714:2203854:221653422165342216815282Bifidobacterium dentium Bd1, complete genomeATP synthase epsilon chain5e-37152
NC_014644:1:142014201734315Gardnerella vaginalis ATCC 14019 chromosome, complete genomeATP synthase F1 sector subunit epsilon1e-1891.7
NC_021177:5697210:571683057168305717204375Streptomyces fulvissimus DSM 40593, complete genomeATP synthase epsilon chain3e-1167
NC_016109:5543112:555731555573155557698384Kitasatospora setae KM-6054, complete genomeputative ATP synthase subunit epsilon3e-1063.9
NC_018750:5399316:541100854110085411382375Streptomyces venezuelae ATCC 10712, complete genomeATP synthase epsilon chain3e-1063.9
NC_019815:679592:689809689809690240432Candidatus Kinetoplastibacterium crithidii (ex Angomonas deaneiF-type H+-transporting ATPase subunit epsilon2e-0754.7
NC_002488:1099975:110079711007971101228432Xylella fastidiosa 9a5c, complete genomeATP synthase subunit epsilon2e-0754.3
NC_013235:402819:415081415081415473393Nakamurella multipartita DSM 44233, complete genomeATP synthase F1, epsilon subunit2e-0754.3
NC_011761:684969:687796687796688311516Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeATP synthase F1 subunit epsilon5e-0753.1
NC_011206:863987:866814866814867329516Acidithiobacillus ferrooxidans ATCC 53993, complete genomeATP synthase F1, epsilon subunit5e-0753.1
NC_013093:7174636:718669271866927187057366Actinosynnema mirum DSM 43827, complete genomeATP synthase F1, epsilon subunit6e-0752.8
NC_019757:5085648:510467251046725105085414Cylindrospermum stagnale PCC 7417, complete genomeATP synthase, F1 epsilon subunit4e-0650.4
NC_004337:3590323:392282139228213923234414Shigella flexneri 2a str. 301, complete genomeATP synthase subunit epsilon4e-0650.4
NC_015572:4916430:494317549431754943597423Methylomonas methanica MC09 chromosome, complete genomeATP synthase subunit epsilon4e-0650.4
NC_007384:4095016:409641940964194096838420Shigella sonnei Ss046, complete genomemembrane-bound ATP synthase, F1 sector, epsilon-subunit4e-0650.1
NC_019673:8114376:812444981244498124820372Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein4e-0650.1
NC_011206:2040000:205676920567692057260492Acidithiobacillus ferrooxidans ATCC 53993, complete genomeATP synthase F1, epsilon subunit6e-0649.7
NC_011761:2131911:216872721687272169218492Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completeATP synthase F1 subunit epsilon6e-0649.7
NC_007516:1974500:198886519888651989275411Synechococcus sp. CC9605, complete genomeATP synthase subunit epsilon6e-0649.7
NC_004757:230541:241984241984242406423Nitrosomonas europaea ATCC 19718, complete genomeATP synthase, Delta/Epsilon chain7e-0649.3
NC_010296:54000:729127291273328417Microcystis aeruginosa NIES-843, complete genomeF0F1 ATP synthase subunit epsilon8e-0649.3