Pre_GI: BLASTP Hits

Some Help

Query: NC_011593:1651635:1657903 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 1657903, End: 1658163, Length: 261

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017219:1651425:165769316576931657953261Bifidobacterium longum subsp. infantis ATCC 15697, complete genome30S ribosomal protein S206e-2199.4
NC_010617:1467000:146709414670941467354261Kocuria rhizophila DC2201, complete genome30S ribosomal protein S209e-1165.5
NC_006361:1547034:156871415687141568974261Nocardia farcinica IFM 10152, complete genome30S ribosomal protein S201e-1065.5
NC_015656:1876627:189820018982001898469270Frankia symbiont of Datisca glomerata chromosome, complete genome30S ribosomal protein S206e-0959.7
NC_015859:1099919:110209011020901102359270Corynebacterium variabile DSM 44702 chromosome, complete genome30S ribosomal protein S207e-0959.3