Pre_GI: BLASTP Hits

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Query: NC_011593:1202726:1218284 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 1218284, End: 1218889, Length: 606

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017219:1203500:121807512180751218491417Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein3e-76284
NC_014246:57021:8101881018828591842Mobiluncus curtisii ATCC 43063 chromosome, complete genomeTraG/TraD family protein2e-55214
NC_015052:1313311:1349250134925013510851836Bifidobacterium longum subsp. infantis 157F, complete genomehypothetical protein1e-54212
NC_006087:765081:7678797678797697231845Leifsonia xyli subsp. xyli str. CTCB07, complete genomeconjugal plasmid transfer, ATPase1e-46186
NC_009089:478328:4830724830724848561785Clostridium difficile 630, complete genomeputative conjugal transfer protein8e-40163
NC_009089:1283000:1310925131092513127121788Clostridium difficile 630, complete genomeputative conjugal transfer protein4e-39160
NC_004116:1276791:1304689130468913065061818Streptococcus agalactiae 2603V/R, complete genome3e-38158
NC_018867:10238:2579025790275651776Dehalobacter sp. CF chromosome, complete genomehypothetical protein1e-36152
NC_011837:238160:2571792571792590711893Clostridium kluyveri NBRC 12016, complete genomehypothetical protein5e-34144
NC_014376:317312:3184953184953203271833Clostridium saccharolyticum WM1 chromosome, complete genome5e-34144
NC_004668:2198027:2252661225266122544361776Enterococcus faecalis V583, complete genomeTraG family protein5e-34144
NC_009706:238160:2571792571792590111833Clostridium kluyveri DSM 555 chromosome, complete genomeplasmid transfer factor-like protein4e-34144
NC_014169:1442435:1452669145266914544621794Bifidobacterium longum subsp. longum JDM301 chromosome, completehypothetical protein3e-34144
NC_016048:2343500:234786723478672348670804Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein4e-33141
NC_016630:434500:4471844471844489441761Filifactor alocis ATCC 35896 chromosome, complete genomeTraG family protein2e-32138
NC_012781:2552723:2567773256777325690801308Eubacterium rectale ATCC 33656, complete genomeATPase involved in conjugal plasmid transfer4e-31134
NC_012781:700226:7296797296797309861308Eubacterium rectale ATCC 33656, complete genomeATPase involved in conjugal plasmid transfer4e-31134
NC_008023:1070986:1082250108225010840431794Streptococcus pyogenes MGAS2096, complete genomeTraG/TraD family5e-31134
NC_015977:3424178:3507521350752135096982178Roseburia hominis A2-183 chromosome, complete genomeTraG/TraD family protein9e-31133
NC_007644:362000:3679313679313699161986Moorella thermoacetica ATCC 39073, complete genomeTRAG protein1e-27122
NC_003869:1971766:1982399198239919844022004Thermoanaerobacter tengcongensis MB4, complete genomeATPase involved in conjugal plasmid transfer3e-27121
NC_015589:3813415:3815476381547638174491974Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeTRAG family protein5e-27120
NC_012654:170956:1875941875941895401947Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequenceATPase involved in conjugal plasmid transfer3e-26118
NC_020450:1254849:1254849125484912567051857Lactococcus lactis subsp. lactis IO-1 DNA, complete genomeconjugal transfer protein TraD5e-26117
NC_004368:1160535:1173758117375811758182061Streptococcus agalactiae NEM316, complete genomehypothetical protein1e-25116
NC_009437:2815500:2820624282062428225101887Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeTRAG family protein1e-25116
NC_012034:2623252:2641160264116026430371878Anaerocellum thermophilum DSM 6725, complete genomeTRAG family protein4e-24110
NC_014652:379833:3913543913543932311878Caldicellulosiruptor hydrothermalis 108 chromosome, completetrag family protein6e-24110
NC_014721:2201790:2213725221372522156381914Caldicellulosiruptor kristjanssonii 177R1B chromosome, completetrag family protein1e-21103
NC_009437:1556934:1568309156830915701471839Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeTRAG family protein1e-2099.4
NC_015603:1:1070110701122211521Lactobacillus kefiranofaciens ZW3 plasmid pWW2, complete sequenceprotein Trs2e-1995.1
NC_017219:538864:553585553585553854270Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein2e-1789.4
NC_011593:533884:553792553792554061270Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein2e-1789.4
NC_009720:583060:6035036035036050321530Xanthobacter autotrophicus Py2, complete genomeTRAG family protein3e-1581.6
NC_010321:35855:4888548885507171833Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeTRAG family protein3e-1478.6
NC_014964:35862:4889248892507241833Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeTRAG family protein3e-1478.6
NC_009253:1031799:1031799103179910345372739Desulfotomaculum reducens MI-1 chromosome, complete genomeTRAG family protein3e-1375.1
NC_014624:1768226:1806146180614618082632118Eubacterium limosum KIST612 chromosome, complete genomeTraG/TraD family protein1e-1273.2
NC_016929:825413:8369198369198386941776Rickettsia canadensis str. CA410 chromosome, complete genometype IV secretion system protein VirB84e-1271.2
NC_009879:835227:8468038468038485781776Rickettsia canadensis str. McKiel, complete genomehypothetical protein4e-1271.2
NC_009253:897684:8991758991759012232049Desulfotomaculum reducens MI-1 chromosome, complete genomeTRAG family protein7e-1270.5
NC_005295:21995:3116531165335702406Ehrlichia ruminantium str. Welgevonden, complete genometype IV secretion system protein VirD42e-1168.9
NC_006831:4500:1217012170145722403Ehrlichia ruminantium str. Gardel, complete genomePutative virD4 protein2e-1168.9
NC_013532:85371:8641786417888432427Anaplasma centrale str. Israel, complete genometype IV secretion system protein VirD45e-1167.8
NC_012026:1135041:1159067115906711614872421Anaplasma marginale str. Florida, complete genomeVirD4 protein (virD4)6e-1167.4
NC_004842:1132441:1154957115495711573772421Anaplasma marginale str. St. Maries, complete genomeVirD4 protein6e-1167.4
NC_010337:616304:6198006198006216201821Heliobacterium modesticaldum Ice1, complete genometrag/trad family protein, putative1e-1066.6
NC_013766:1835964:1851550185155018533521803Listeria monocytogenes 08-5578 chromosome, complete genometype IV secretion system protein VirD42e-1066.2
NC_013768:1802313:1818281181828118200831803Listeria monocytogenes 08-5923, complete genometype IV secretion system protein VirD42e-1066.2
NC_014376:3009403:3033976303397630358231848Clostridium saccharolyticum WM1 chromosome, complete genomeTRAG family protein1e-1066.2
NC_015589:712626:7180157180157200752061Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeTRAG family protein2e-1065.9
NC_012416:4973:83058305103232019Wolbachia sp. wRi, complete genometype IV secretion system protein VirD42e-1065.9
NC_002978:4973:82698269102151947Wolbachia endosymbiont of Drosophila melanogaster, complete genometype IV secretion system protein VirD43e-1065.1
NC_016048:4163225:4199650419965042014521803Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein3e-1065.1
NC_014816:1592799:1596795159679515984711677Asticcacaulis excentricus CB 48 chromosome 1, complete sequencetrag family protein6e-1064.3
NC_006578:1:1148111481141142634Bacillus thuringiensis serovar konkukian str. 97-27 plasmidpossible conjugation protein6e-1063.9
NC_011837:3814000:3839101383910138409031803Clostridium kluyveri NBRC 12016, complete genomehypothetical protein1e-0963.5
NC_009706:3882500:3907598390759839094001803Clostridium kluyveri DSM 555 chromosome, complete genomeTraG-like protein1e-0963.5
NC_007907:960104:1031622103162210334421821Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0963.2
NC_007797:1451804:1460198146019814624202223Anaplasma phagocytophilum HZ, complete genometype IV secretion system protein VirD41e-0963.2
NC_018870:757416:7824677824677843051839Thermacetogenium phaeum DSM 12270 chromosome, complete genomeTRAG-like protein1e-0962.8
NC_021184:3533500:3549757354975735515741818Desulfotomaculum gibsoniae DSM 7213, complete genometype IV secretory pathway, VirD4 component2e-0962.4
NC_014816:545441:5663965663965680721677Asticcacaulis excentricus CB 48 chromosome 1, complete sequencetrag family protein2e-0962
NC_018867:1357540:1360767136076713625871821Dehalobacter sp. CF chromosome, complete genomeTRAG family protein3e-0962
NC_018866:1279000:1282227128222712840471821Dehalobacter sp. DCA chromosome, complete genomeTRAG family protein3e-0962
NC_016791:3891272:3914625391462539164421818Clostridium sp. BNL1100 chromosome, complete genometype IV secretory pathway, VirD4 component3e-0961.6
NC_007798:652317:6585716585716604961926Neorickettsia sennetsu str. Miyayama, complete genometype IV secretion system protein VirD44e-0961.6
NC_007907:5185510:5263303526330352651201818Desulfitobacterium hafniense Y51, complete genomehypothetical protein4e-0961.2
NC_014414:2540189:2553515255351525553531839Parvularcula bermudensis HTCC2503 chromosome, complete genomeconjugal transfer protein traG7e-0960.5
NC_016791:3953972:3982848398284839846681821Clostridium sp. BNL1100 chromosome, complete genometype IV secretory pathway, VirD4 component8e-0960.1
NC_015221:12389:3188831888337321845Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequenceTRAG family protein4e-0858.2
NC_007930:99693:1020071020071048712865Lactobacillus salivarius subsp. salivarius UCC118 plasmid pMP118,Conjugation-related ATPase4e-0857.8
NC_015437:697051:7214467214467238392394Selenomonas sputigena ATCC 35185 chromosome, complete genomeTRAG family protein1e-0756.6
NC_003902:4111283:4123510412351041247211212Xanthomonas campestris pv. campestris str. ATCC 33913, completetruncated NTPase1e-0756.2
NC_010515:1124298:1127230112723011289421713Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceTRAG family protein2e-0755.5
NC_004757:267165:2820272820272836641638Nitrosomonas europaea ATCC 19718, complete genomeTRAG protein2e-0755.5
NC_015259:3902136:3905033390503339071922160Polymorphum gilvum SL003B-26A1 chromosome, complete genomeTraG/TraD family protein2e-0755.5
NC_016814:18000:3264032640347392100Sinorhizobium fredii HH103 plasmid pSfHH103c complete sequenceProtein virD42e-0755.5
NC_008061:2106848:2109780210978021114531674Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceTRAG protein3e-0755.1
NC_014158:233733:2719842719842737351752Tsukamurella paurometabola DSM 20162 chromosome, complete genomeconjugal transfer protein3e-0755.1
NC_017271:4058642:4069267406926740709701704Xanthomonas campestris pv. raphani 756C chromosome, completetype IV secretion system protein VirD44e-0754.7
NC_014100:2782000:2795208279520827971601953Caulobacter segnis ATCC 21756 chromosome, complete genomeTRAG family protein4e-0754.7
NC_017271:149856:1689951689951705751581Xanthomonas campestris pv. raphani 756C chromosome, completetype IV secretion system protein VirD44e-0754.7
NC_010338:2443765:2450624245062424523451722Caulobacter sp. K31, complete genomeTRAG family protein4e-0754.7
NC_015850:1220444:1220444122044412230202577Acidithiobacillus caldus SM-1 chromosome, complete genomeTraG5e-0754.3
NC_011296:281930:2970702970702987821713Thermodesulfovibrio yellowstonii DSM 11347, complete genomeputative conjugative transfer protein TraD8e-0753.5
NC_011059:670345:6749096749096770952187Prosthecochloris aestuarii DSM 271, complete genome1e-0653.1
NC_007086:2887875:2924209292420929259061698Xanthomonas campestris pv. campestris str. 8004, complete genomeputative NTPase VagA1e-0653.1
NC_009254:365812:3745933745933763111719Burkholderia vietnamiensis G4 chromosome 3, complete sequenceTRAG family protein3e-0652
NC_003295:2787371:2792029279202927940562028Ralstonia solanacearum GMI1000, complete genomePROBABLE PLASMID CONJUGATION TRAG TRANSMEMBRANE PROTEIN3e-0651.6
NC_015942:722980:7396097396097418762268Acidithiobacillus ferrivorans SS3 chromosome, complete genomeTRAG family protein3e-0651.6
NC_015675:6342164:6345446634544663471911746Mesorhizobium opportunistum WSM2075 chromosome, complete genomeTRAG family protein3e-0651.6
NC_014923:5787493:5790775579077557925201746Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeTRAG family protein3e-0651.6
NC_019973:5716453:5719735571973557214801746Mesorhizobium australicum WSM2073, complete genometype IV secretory pathway, VirD4 component3e-0651.6
NC_012982:711122:7139907139907159751986Hirschia baltica ATCC 49814, complete genomeTRAG family protein6e-0650.8
NC_014414:1104386:1109337110933711111751839Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein6e-0650.8
NC_018691:3082000:3095819309581930978222004Alcanivorax dieselolei B5 chromosome, complete genomeTraG-like protein8e-0650.4