Pre_GI: BLASTP Hits

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Query: NC_011593:1163000:1176986 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 1176986, End: 1177219, Length: 234

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013315:4015119:4024620402462040260141395Clostridium difficile CD196 chromosome, complete genomeconjugative transposon FtsK/SpoIIIE-like protein5e-1786.3
NC_013316:4095905:4105406410540641068001395Clostridium difficile R20291, complete genomeputative conjugative transposon FtsK_SpoIIIE-related protein5e-1786.3
NC_009089:428075:4512214512214525911371Clostridium difficile 630, complete genomeconjugative transposon FtsK/SpoIIIE-related protein3e-1684
NC_009089:3935500:3961825396182539632191395Clostridium difficile 630, complete genomeputative conjugative transposon FtsK_SpoIIIE-related protein7e-1579.3
NC_015977:2966971:298216029821602982516357Roseburia hominis A2-183 chromosome, complete genomeconjugative transposon FtsK/SpoIIIE-like protein2e-1271.6