Pre_GI: BLASTP Hits

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Query: NC_011528:767940:783894 Coxiella burnetii CbuK_Q154, complete genome

Start: 783894, End: 784268, Length: 375

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Coxiella burnetii K Q154 was isolated from a patient with endocarditis and contains the plasmid QpRS. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009727:1001203:101806310180631018437375Coxiella burnetii Dugway 7E9-12, complete genomecrcB protein5e-55212
NC_014758:1387470:140549514054951405863369Calditerrivibrio nitroreducens DSM 19672 chromosome, completecamphor resistance protein crcb2e-1684
NC_015672:2102580:211539621153962115776381Flexistipes sinusarabici DSM 4947 chromosome, complete genomeCrcB-like protein2e-1374.7
NC_013894:1194458:121254412125441212918375Thermocrinis albus DSM 14484 chromosome, complete genomeCrcB protein7e-1269.3
NC_014834:959986:989471989471989851381Rhodopseudomonas palustris DX-1 chromosome, complete genomecamphor resistance CrcB protein9e-1268.9
NC_015733:3736104:383283138328313833205375Pseudomonas putida S16 chromosome, complete genomecamphor resistance protein CrcB5e-1063.2
NC_015931:857327:858514858514858960447Pyrolobus fumarii 1A, complete genomeCrcB protein5e-1063.2
NC_004088:1291754:131381813138181314207390Yersinia pestis KIM, complete genomecamphor resistance protein CrcB5e-1063.2
NC_002947:4484824:451009145100914510465375Pseudomonas putida KT2440, complete genomecrcB protein5e-1063.2
NC_008150:2785830:279282927928292793212384Yersinia pestis Antiqua, complete genomehypothetical protein6e-1062.8
NC_003143:2895617:291768629176862918069384Yersinia pestis CO92, complete genomecamphor resistance protein CrcB6e-1062.8
NC_009465:29735:522395223952631393Candidatus Vesicomyosocius okutanii HA, complete genomehypothetical protein9e-1062.4
NC_008800:3279468:328209532820953282478384Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,camphor resistance protein CrcB2e-0960.8
NC_020064:1150982:116839911683991168782384Serratia marcescens FGI94, complete genomecamphor resistance protein CrcB4e-0960.5
NC_014166:401815:403684403684404070387Arcobacter nitrofigilis DSM 7299 chromosome, complete genomecamphor resistance CrcB protein3e-0960.5
NC_014935:711765:732375732375732758384Nitratifractor saLSUginis DSM 16511 chromosome, complete genomecamphor resistance protein crcb4e-0960.1
NC_015224:1440283:145549814554981455881384Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein6e-0959.7
NC_006087:28490:675526755267965414Leifsonia xyli subsp. xyli str. CTCB07, complete genomeintegral membrane protein9e-0958.9
NC_014217:1352777:135619613561961356591396Starkeya novella DSM 506 chromosome, complete genomeCamphor resistance CrcB protein1e-0858.5
NC_015555:49842:572945729457665372Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeCrcB-like protein1e-0858.5
NC_014964:2237979:225763522576352258039405Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeCrcB protein2e-0857.8
NC_014538:33718:405494054940953405Thermoanaerobacter sp. X513 chromosome, complete genomeCrcB protein2e-0857.8
NC_010320:33814:406454064541049405Thermoanaerobacter sp. X514 chromosome, complete genomeCrcB protein2e-0857.8
NC_010321:2256758:227049122704912270895405Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeCrcB protein2e-0857.8
NC_019970:35985:441854418544556372Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecrcB protein2e-0857.8
NC_015320:1342105:135593813559381356318381Archaeoglobus veneficus SNP6 chromosome, complete genomeCrcB-like protein2e-0857.8
NC_014217:1352777:135571013557101356111402Starkeya novella DSM 506 chromosome, complete genomeCrcB protein3e-0857.4
NC_014209:81643:101443101443101844402Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CrcB protein3e-0857.4
NC_014814:3926676:394193039419303942325396Mycobacterium sp. Spyr1 chromosome, complete genomecamphor resistance protein CrcB4e-0857
NC_010002:3887926:390905339090533909439387Delftia acidovorans SPH-1, complete genomeCrcB protein4e-0857
NC_013921:36000:430634306343464402Thermoanaerobacter italicus Ab9 chromosome, complete genomeCrcB protein4e-0856.6
NC_014410:51711:586355863559006372Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,CrcB protein5e-0856.6
NC_015577:786155:788233788233788610378Treponema azotonutricium ZAS-9 chromosome, complete genomeCrcB protein5e-0856.6
NC_013947:6221877:623403862340386234418381Stackebrandtia nassauensis DSM 44728 chromosome, complete genomeCrcB protein6e-0856.2
NC_015958:57957:626596265963060402Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeCrcB-like protein1e-0755.5
NC_010337:1188373:119969611996961200064369Heliobacterium modesticaldum Ice1, complete genomecrcb-like protein2e-0754.7
NC_011565:1022000:102737210273721027749378Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2,protein CrcB-homolog2e-0754.3
NC_021182:2059143:207701220770122077371360Clostridium pasteurianum BC1, complete genomecrcB protein4e-0753.5
NC_009464:251550:262714262714263067354Uncultured methanogenic archaeon RC-I, complete genomeputative camphor resistance protein6e-0753.1
NC_014304:77715:923809238092754375Erwinia billingiae Eb661 plasmid pEB102, complete sequencecamphor resistance CrcB family protein6e-0753.1
NC_016816:4129299:416613841661384166518381Pantoea ananatis LMG 5342, complete genomecamphor resistance protein CrcB5e-0753.1
NC_014410:51711:582345823458635402Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,CrcB protein6e-0752.8
NC_007498:1148249:115363811536381154009372Pelobacter carbinolicus DSM 2380, complete genomeCrcB protein7e-0752.8
NC_014364:3707311:373119937311993731558360Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCrcB protein7e-0752.8
NC_019970:35985:437844378444185402Thermoanaerobacterium thermosaccharolyticum M0795, complete genomecrcB protein8e-0752.4
NC_014121:489500:495680495680496054375Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative CrcB-like protein9e-0752.4
NC_015555:49842:568935689357294402Thermoanaerobacterium xylanolyticum LX-11 chromosome, completeCrcB-like protein1e-0652
NC_009074:2970435:297262129726212973007387Burkholderia pseudomallei 668 chromosome I, complete sequencecrcB protein1e-0651.6
NC_012724:829830:844812844812845198387Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein2e-0651.2
NC_016147:1825827:184673518467351847139405Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecamphor resistance protein CrcB2e-0651.2
NC_017986:331610:343424343424343807384Pseudomonas putida ND6 chromosome, complete genomecamphor resistance protein CrcB4e-0650.4
NC_016860:4024000:402423040242304024610381Salmonella enterica subsp. enterica serovar Typhimurium strcamphor resistance protein CrcB5e-0649.7
NC_011747:11532:149651496515345381Escherichia coli S88 plasmid pECOS88, complete sequencecamphor resistance protein CrcB5e-0649.7
NC_014733:2851984:810881088491384Methylovorus sp. MP688 chromosome, complete genomecrcb protein7e-0649.3