Pre_GI: BLASTP Hits

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Query: NC_011528:1769349:1770759 Coxiella burnetii CbuK_Q154, complete genome

Start: 1770759, End: 1771664, Length: 906

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Coxiella burnetii K Q154 was isolated from a patient with endocarditis and contains the plasmid QpRS. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002971:1545924:154742315474231548328906Coxiella burnetii RSA 493, complete genomeribosomal protein S6 modification protein2e-174611
NC_009727:357206:372388372388373293906Coxiella burnetii Dugway 7E9-12, complete genomeribosomal protein S6 modification protein2e-174611
NC_010117:1633447:163480516348051635710906Coxiella burnetii RSA 331, complete genomeribosomal protein S6 modification protein2e-174611
NC_009092:4337617:436648643664864367391906Shewanella loihica PV-4, complete genomealpha-L-glutamate ligases, RimK family3e-120431
NC_019940:389979:405806405806406711906Thioflavicoccus mobilis 8321 chromosome, complete genomealpha-L-glutamate ligase4e-118424
NC_005773:5684000:568441456844145685319906Pseudomonas syringae pv. phaseolicola 1448A, complete genomeribosomal protein S6 modification protein3e-117421
NC_016612:3361802:337741033774103378312903Klebsiella oxytoca KCTC 1686 chromosome, complete genomeribosomal protein S6 modification protein5e-110397
NC_010995:1459831:146181414618141462719906Cellvibrio japonicus Ueda107, complete genomeribosomal protein S6 modification protein5e-108390
NC_010296:1081728:110213011021301103035906Microcystis aeruginosa NIES-843, complete genomeribosomal protein S6 modification protein1e-106386
NC_011729:4073761:409049240904924091397906Cyanothece sp. PCC 7424 chromosome, complete genomeRimK family alpha-L-glutamate ligase3e-105381
NC_010546:2711929:271313627131362714065930Cyanothece sp. ATCC 51142 chromosome circular, complete sequenceputative S6 modification enzyme7e-104377
NC_013222:432947:4329474329474343201374Robiginitalea biformata HTCC2501, complete genomepossible ribosomal protein S6 modification protein6e-95347
NC_010688:1192410:123846512384651239370906Xanthomonas campestris pv. campestris, complete genomeribosomal protein S6 modification protein9e-95346
NC_017271:3641705:365951636595163660505990Xanthomonas campestris pv. raphani 756C chromosome, completeribosomal protein S6 modification protein2e-94345
NC_007086:1224867:126398712639871264862876Xanthomonas campestris pv. campestris str. 8004, complete genomeribosomal protein S6 modification protein6e-94343
NC_003902:3666544:368200436820043682879876Xanthomonas campestris pv. campestris str. ATCC 33913, completeribosomal protein S6 modification protein6e-94343
NC_017267:3612682:363560636356063636523918Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completeribosomal protein S6 modification protein1e-92340
NC_007508:3835000:385499138549913855878888Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeribosomal protein S6 modification protein6e-93340
NC_020064:1611820:162937616293761630263888Serratia marcescens FGI94, complete genomealpha-L-glutamate ligase, RimK family6e-92337
NC_013037:3994083:401298740129874013889903Dyadobacter fermentans DSM 18053, complete genomealpha-L-glutamate ligase, RimK family2e-91335
NC_011071:3544450:356585935658593566737879Stenotrophomonas maltophilia R551-3, complete genomealpha-L-glutamate ligase, RimK family2e-91335
NC_015638:923660:940134940134941009876Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeRimK family alpha-L-glutamate ligase6e-88324
NC_012803:2454380:2469896246989624711311236Micrococcus luteus NCTC 2665, complete genomeSSU ribosomal protein S6P modification protein1e-85316
NC_009850:2169459:218813821881382189067930Arcobacter butzleri RM4018, complete genomeribosomal protein S6 modification protein6e-83307
NC_016147:730810:750965750965751873909Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeribosomal protein S6 modification protein1e-81303
NC_003919:3812778:383309938330993833845747Xanthomonas axonopodis pv. citri str. 306, complete genomeribosomal protein S6 modification protein8e-74277
NC_009053:553298:553298553298554212915Actinobacillus pleuropneumoniae L20, complete genomeribosomal protein S6 modification protein5e-56218
NC_011145:2543321:256312825631282564069942Anaeromyxobacter sp. K, complete genomealpha-L-glutamate ligase, RimK family2e-54212
NC_011891:2607812:262724726272472628188942Anaeromyxobacter dehalogenans 2CP-1, complete genomealpha-L-glutamate ligase, RimK family5e-54211
NC_017030:6252756:626869362686936269670978Corallococcus coralloides DSM 2259 chromosome, complete genomealpha-L-glutamate ligase4e-54211
NC_007760:1806136:181165518116551812596942Anaeromyxobacter dehalogenans 2CP-C, complete genomeS6 modification enzyme RimK4e-54211
NC_020126:4430142:4433623443362344346271005Myxococcus stipitatus DSM 14675, complete genomealpha-L-glutamate ligase7e-53207
NC_009675:2515669:253284225328422533816975Anaeromyxobacter sp. Fw109-5 chromosome, complete genomealpha-L-glutamate ligase4e-52205
NC_015711:5479879:548484554848455485762918Myxococcus fulvus HW-1 chromosome, complete genomealpha-L-glutamate ligase6e-47187
NC_013851:3166969:3188785318878531913402556Allochromatium vinosum DSM 180 chromosome, complete genomealpha-L-glutamate ligase, RimK family3e-27122
NC_014471:1269571:129717812971781298077900Ignisphaera aggregans DSM 17230 chromosome, complete genomealpha-L-glutamate ligase, RimK family1e-22107
NC_012726:115500:138248138248139075828Sulfolobus islandicus M.16.4 chromosome, complete genomealpha-L-glutamate ligase4e-22105
NC_013769:123958:126476126476127303828Sulfolobus islandicus L.D.8.5 chromosome, complete genomealpha-L-glutamate ligase5e-22105
NC_009776:1249350:126449612644961265353858Ignicoccus hospitalis KIN4/I, complete genomelysine biosynthesis enzyme LysX1e-20100
NC_015518:997707:100165710016571002457801Acidianus hospitalis W1 chromosome, complete genomelysine biosynthesis enzyme LysX7e-2098.2
NC_013156:182896:204352204352205227876Methanocaldococcus fervens AG86, complete genomealpha-L-glutamate ligase, RimK family2e-1996.7
NC_015151:665346:684990684990685892903Vulcanisaeta moutnovskia 768-28 chromosome, complete genomealpha-L-glutamate ligase, RimK family2e-1996.3
NC_015435:251958:258011258011258856846Metallosphaera cuprina Ar-4 chromosome, complete genomeL-2-aminoadipate N-acetyltransferase1e-1790.9
NC_009440:1908864:192775319277531928598846Metallosphaera sedula DSM 5348 chromosome, complete genomeL-2-aminoadipate N-acetyltransferase2e-1790.1
NC_015562:627000:643084643084643905822Methanotorris igneus Kol 5 chromosome, complete genomealpha-L-glutamate ligase, RimK family4e-1789
NC_012623:1167289:118664511866451187493849Sulfolobus islandicus Y.N.15.51 chromosome, complete genomelysine biosynthesis protein LysX1e-1687.4
NC_003106:1484768:150403715040371504885849Sulfolobus tokodaii str. 7, complete genomehypothetical ribosomal protein S6 modification protein1e-1687.4
NC_015954:463500:480017480017480883867Halophilic archaeon DL31 chromosome, complete genomelysine biosynthesis enzyme LysX2e-1687
NC_002754:537792:559125559125559973849Sulfolobus solfataricus P2, complete genomeRibosomal protein S6 modification protein (rimK-2)2e-1686.7
NC_015518:761380:810079810079810930852Acidianus hospitalis W1 chromosome, complete genomelysine biosynthesis enzyme LysX2e-1686.3
NC_010175:398453:423655423655424503849Chloroflexus aurantiacus J-10-fl, complete genomelysine biosynthesis enzyme LysX6e-1685.1
NC_007181:1364522:138460213846021385450849Sulfolobus acidocaldarius DSM 639, complete genomeconserved ribosomal protein S67e-1684.7
NC_014761:1795304:179760017976001798466867Oceanithermus profundus DSM 14977 chromosome, complete genomel-2-aminoadipate n-acetyltransferase1e-1584.3
NC_015435:1713051:173369417336941734554861Metallosphaera cuprina Ar-4 chromosome, complete genomeL-2-aminoadipate N-acetyltransferase2e-1582.8
NC_013202:606204:611283611283612149867Halomicrobium mukohataei DSM 12286, complete genomeRimK domain protein ATP-grasp2e-1480.5
NC_014960:1380500:140240914024091403359951Anaerolinea thermophila UNI-1, complete genomelysine biosynthesis protein LysX3e-1479.7
NC_010085:1174917:117940811794081180265858Nitrosopumilus maritimus SCM1, complete genomelysine biosynthesis enzyme LysX3e-1376.3
NC_015948:1636491:1649135164913516504871353Haloarcula hispanica ATCC 33960 chromosome chromosome I, completeRimK family alpha-L-glutamate ligase/30S ribosomal protein S6 modification protein2e-1376.3
NC_014820:71565:9947099470100318849Cenarchaeum symbiosum A, complete genomeglutathione synthase/ribosomal protein S6 modification enzyme (glutaminyl transferase)3e-1272.8
NC_013769:1908164:193479919347991935650852Sulfolobus islandicus L.D.8.5 chromosome, complete genomelysine biosynthesis protein LysX3e-1272.4
NC_012726:1792344:181974318197431820594852Sulfolobus islandicus M.16.4 chromosome, complete genomelysine biosynthesis protein LysX3e-1272.4
NC_012622:1859149:188578318857831886634852Sulfolobus islandicus Y.G.57.14 chromosome, complete genomelysine biosynthesis protein LysX3e-1272.4
NC_012589:1917421:194756419475641948415852Sulfolobus islandicus L.S.2.15, complete genomelysine biosynthesis enzyme LysX3e-1272.4
NC_010085:1174917:118519211851921186034843Nitrosopumilus maritimus SCM1, complete genomelysine biosynthesis enzyme LysX5e-1272
NC_012588:1788084:181548318154831816334852Sulfolobus islandicus M.14.25 chromosome, complete genomelysine biosynthesis protein LysX5e-1272
NC_012623:733638:739081739081739932852Sulfolobus islandicus Y.N.15.51 chromosome, complete genomelysine biosynthesis protein LysX5e-1272
NC_014122:685701:687250687250688110861Methanocaldococcus infernus ME chromosome, complete genomeRimK domain protein ATP-grasp1e-1170.9
NC_002754:105256:132570132570133430861Sulfolobus solfataricus P2, complete genomeRibosomal protein S6 modification protein (rimK-1)1e-1170.9
NC_014729:1185294:1188235118823511895931359Halogeometricum borinquense DSM 11551 chromosome, complete genomealpha-l-glutamate ligase, rimk family1e-1170.9
NC_007492:2994036:2995232299523229968061575Pseudomonas fluorescens PfO-1, complete genomehypothetical protein7e-1168.2
NC_000961:1481685:151127115112711512092822Pyrococcus horikoshii OT3, complete genomeribosomal protein S6 modification protein1e-1067.4
NC_015379:2751342:2762266276226627638521587Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein2e-1067
NC_015474:252390:284388284388285209822Pyrococcus sp. NA2 chromosome, complete genomeribosomal protein S6 modification protein5e-1065.5
NC_020388:1100759:113980811398081140674867Natronomonas moolapensis 8.8.11 complete genomeRimK family protein7e-1064.7
NC_003413:214120:225439225439226260822Pyrococcus furiosus DSM 3638, complete genomeribosomal protein s6 modification protein2e-0963.5
NC_011901:2833317:283361028336102834401792Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeRimK domain-containing protein3e-0962.8
NC_002607:81452:829328293283789858Halobacterium sp. NRC-1, complete genomeRimK3e-0962.4
NC_003919:3812778:383295938329593833117159Xanthomonas axonopodis pv. citri str. 306, complete genomeribosomal protein S6 modification protein5e-0962
NC_000868:416958:423603423603424424822Pyrococcus abyssi GE5, complete genomeribosomal protein s6 modification protein.7e-0961.6
NC_013967:2641433:2642590264259026439511362Haloferax volcanii DS2 chromosome, complete genomehypothetical protein3e-0859.3
NC_002516:2113186:2127684212768421291711488Pseudomonas aeruginosa PAO1, complete genomehypothetical protein4e-0858.9
NC_018080:3448392:3449856344985634513431488Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein4e-0858.9
NC_008463:3503576:3505040350504035065271488Pseudomonas aeruginosa UCBPP-PA14, complete genomeribosomal protein S6 modification enzyme4e-0858.9
NC_008942:1198000:119858111985811199384804Methanocorpusculum labreanum Z, complete genomehypothetical protein8e-0858.2
NC_002678:4885790:4900276490027649015051230Mesorhizobium loti MAFF303099, complete genomehypothetical protein1e-0757.4
NC_019973:5899142:5899142589914259004281287Mesorhizobium australicum WSM2073, complete genomebiotin carboxylase1e-0757.4
NC_014923:5970182:5970182597018259714681287Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeCarbamoyl-phosphate synthase L chain ATP-binding protein1e-0757.4
NC_015675:6493444:6524853652485365261391287Mesorhizobium opportunistum WSM2075 chromosome, complete genomeATP-dependent carboxylate-amine ligase domain-containing protein ATP-grasp1e-0757.4
NC_018080:6048516:606163460616346062593960Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein3e-0755.8
NC_011770:3735162:3736626373662637381131488Pseudomonas aeruginosa LESB58, complete genomeribosomal protein S6 modification enzyme1e-0654.3
NC_013192:1824174:184599818459981846924927Leptotrichia buccalis DSM 1135, complete genomeD-alanine/D-alanine ligase4e-0652.4
NC_016812:4246542:424884742488474249794948Sinorhizobium fredii HH103, complete genomeglutathione synthetase9e-0651.2