Pre_GI: BLASTP Hits

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Query: NC_011527:1255998:1258739 Coxiella burnetii CbuG_Q212, complete genome

Start: 1258739, End: 1259488, Length: 750

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Coxiella burnetii G Q212 was isolated from a case of endocarditis and does not carry a plasmid. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011528:1492000:149550014955001496249750Coxiella burnetii CbuK_Q154, complete genome3-oxoacyl-[acyl-carrier protein] reductase2e-124444
NC_007205:499808:523831523831524610780Candidatus Pelagibacter ubique HTCC1062, complete genomeFabG-like protein2e-1375.9
NC_008536:2717891:273179127317912732546756Solibacter usitatus Ellin6076, complete genomeshort-chain dehydrogenase/reductase SDR5e-1065.1
NC_010803:2067539:209194520919452092697753Chlorobium limicola DSM 245, complete genomeshort-chain dehydrogenase/reductase SDR2e-0962.8
NC_009512:3282500:328434332843433285122780Pseudomonas putida F1, complete genomeshort-chain dehydrogenase/reductase SDR3e-0962.4
NC_014643:2056280:212500921250092125758750Rothia dentocariosa ATCC 17931 chromosome, complete genome3-oxoacyl-[acyl-carrier-protein] reductase4e-0961.6
NC_015474:723553:725506725506726297792Pyrococcus sp. NA2 chromosome, complete genomeshort chain dehydrogenase2e-0859.7
NC_006155:2893802:291619529161952916929735Yersinia pseudotuberculosis IP 32953, complete genome3-ketoacyl-(acyl-carrier-protein) reductase5e-0858.2
NC_009800:1632585:165058516505851651331747Escherichia coli HS, complete genomeNADP-dependent l-serine/l-allo-threonine dehydrogenase ydfg2e-0756.6
NC_014923:6060859:606231460623146063051738Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete3-oxoacyl-(acyl-carrier-protein) reductase2e-0756.2
NC_015675:6615245:661698266169826617719738Mesorhizobium opportunistum WSM2075 chromosome, complete genome3-oxoacyl-(acyl-carrier-protein) reductase2e-0756.2
NC_019973:5989816:599127159912715992008738Mesorhizobium australicum WSM2073, complete genome3-oxoacyl-(acyl-carrier-protein) reductase2e-0756.2
NC_014168:2575799:257697725769772577702726Segniliparus rotundus DSM 44985 chromosome, complete genomeshort-chain dehydrogenase/reductase SDR4e-0755.5
NC_015425:34861:449684496845720753Clostridium botulinum BKT015925 chromosome, complete genome3-oxoacyl-ACP reductase3e-0755.5
NC_010623:1961685:203428320342832035035753Burkholderia phymatum STM815 chromosome 2, complete sequenceshort-chain dehydrogenase/reductase SDR6e-0754.7
NC_016582:9664000:967547896754789676182705Streptomyces bingchenggensis BCW-1 chromosome, complete genome3-oxoacyl-ACP reductase7e-0754.7
NC_003063:304962:332827332827333588762Agrobacterium tumefaciens str. C58 chromosome linear, completehypothetical protein9e-0754.3
NC_009832:4564752:457645345764534577205753Serratia proteamaculans 568, complete genomeshort-chain dehydrogenase/reductase SDR1e-0653.9
NC_004557:81362:895578955790312756Clostridium tetani E88, complete genome3-ketoacyl-(acyl-carrier-protein) reductase1e-0653.9
NC_012883:636560:649846649846650637792Thermococcus sibiricus MM 739, complete genomeshort-chain alcohol dehydrogenase9e-0753.9
NC_014306:2518996:252140425214042522171768Erwinia billingiae Eb661, complete genomeGluconate 5-dehydrogenase (5-keto-D-gluconate 5-reductase)2e-0652.8
NC_007645:2181739:219527721952772196011735Hahella chejuensis KCTC 2396, complete genome3-oxoacyl-(acyl-carrier-protein) reductase4e-0652
NC_015379:4249238:426611042661104266886777Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative dehydrogenase5e-0651.6
NC_009654:4716417:473479447347944735570777Marinomonas sp. MWYL1, complete genomeshort-chain dehydrogenase/reductase SDR7e-0651.2