Pre_GI: BLASTP Hits

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Query: NC_011415:2153243:2159474 Escherichia coli SE11 chromosome, complete genome

Start: 2159474, End: 2160181, Length: 708

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016845:2274500:228340522834052284115711Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,DNA-binding protein Roi3e-75281
NC_014121:2745097:275852527585252759004480Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein1e-57223
NC_017328:303987:322722322722323444723Shigella flexneri 2002017 chromosome, complete genomeDNA-binding protein Roi6e-35147
NC_013361:1558423:157703215770321577754723Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding protein1e-32139
NC_011601:1039500:105684210568421057564723Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding protein3e-27122
NC_008258:269806:293814293814294536723Shigella flexneri 5 str. 8401, complete genomeputative DNA-binding protein Roi of bacteriophage BP-933W5e-27121
NC_011770:860944:874209874209874973765Pseudomonas aeruginosa LESB58, complete genomeputative phage-related protein2e-26119
NC_005966:2110549:212319821231982123923726Acinetobacter sp. ADP1, complete genomeputative DNA-binding protein (Roi)3e-26118
NC_013364:1183000:120081812008181201540723Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding protein6e-24110
NC_002655:1332961:134955513495551350283729Escherichia coli O157:H7 EDL933, complete genomeputative DNA-binding protein Roi of bacteriophage BP-933W6e-24110
NC_009778:959982:982338982338983075738Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein7e-2097.4
NC_013282:1804909:182067518206751821400726Cronobacter turicensis, complete genomehypothetical protein8e-2097.4
NC_004129:4368356:4377096437709643781151020Pseudomonas fluorescens Pf-5, complete genomehypothetical protein3e-1995.1
NC_015566:3659318:366059336605933661267675Serratia sp. AS12 chromosome, complete genomePhage regulatory protein, Rha-like protein1e-1686.7
NC_017047:1906000:191134119113411912000660Rahnella aquatilis HX2 chromosome, complete genomephage antirepressor protein5e-1684.7
NC_010468:1343228:134738713473871347989603Escherichia coli ATCC 8739, complete genomehypothetical protein6e-0754.7