Pre_GI: BLASTP Hits

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Query: NC_011369:1135592:1165142 Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete

Start: 1165142, End: 1167157, Length: 2016

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing plant symbiont. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of American and African origin used in farming, and is therefore one of the most important clover inoculants but is incompatible with Mediterranean perennial clovers, such as those nodulated by the dissimilar strain WSM1325. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015976:2406036:240951324095132410091579Sphingobium sp. SYK-6, complete genomehypothetical protein1e-1585.5
NC_013858:416000:4160644160644172721209Azospirillum sp. B510 plasmid pAB510d, complete sequencehypothetical protein9e-1169.3
NC_016587:523215:5232155232155243691155Azospirillum lipoferum 4B plasmid AZO_p4, complete sequencehypothetical protein6e-1066.6
NC_011757:4293000:4304134430413443082284095Methylobacterium chloromethanicum CM4, complete genomeTransglycosylase domain protein6e-1066.6
NC_010125:3667452:3687352368735236895982247Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein1e-0862
NC_007802:224470:2303052303052319841680Jannaschia sp. CCS1, complete genomehypothetical protein4e-0860.5