Pre_GI: BLASTP Hits

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Query: NC_011369:1135592:1155827 Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete

Start: 1155827, End: 1157665, Length: 1839

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing plant symbiont. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of American and African origin used in farming, and is therefore one of the most important clover inoculants but is incompatible with Mediterranean perennial clovers, such as those nodulated by the dissimilar strain WSM1325. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015563:4583906:4588748458874845910872340Delftia sp. Cs1-4 chromosome, complete genomehypothetical protein3e-21103
NC_014910:1734634:1734634173463417369012268Alicycliphilus denitrificans BC chromosome, complete genomephage associated protein1e-1688.6
NC_007614:1662874:1670005167000516719901986Nitrosospira multiformis ATCC 25196 chromosome 1, completeputative phage portal protein2e-1688.2
NC_011035:541560:5456305456305478822253Neisseria gonorrhoeae NCCP11945 chromosome, complete genomeputative phage associated protein2e-1481.3
NC_002946:1020175:1058674105867410609262253Neisseria gonorrhoeae FA 1090, complete genomehypothetical protein, putative phage associated protein2e-1481.3
NC_017511:522679:5239535239535262052253Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genomeputative phage associated protein3e-1480.5
NC_012779:1939747:1939747193974719418612115Edwardsiella ictaluri 93-146, complete genomehypothetical protein1e-1378.6
NC_012846:929570:9512649512649532732010Bartonella grahamii as4aup, complete genomeputative phage portal protein8e-1272.8
NC_005956:1616804:1614966161496616168191854Bartonella henselae str. Houston-1, complete genomehypothetical protein6e-1169.7
NC_011138:831585:8581388581388602402103Alteromonas macleodii 'Deep ecotype', complete genomehypothetical genomic island protein4e-0963.9
NC_008783:222000:2269522269522288381887Bartonella bacilliformis KC583, complete genomehypothetical protein4e-0860.5
NC_009511:4882047:4890161489016148921792019Sphingomonas wittichii RW1 chromosome, complete genomehypothetical protein5e-0653.5