Pre_GI: BLASTN Hits

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Query: NC_011353:2825500 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Start: 2825500, End: 2844614, Length: 19115

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008253:21985832198583221778119199Escherichia coli 536, complete genome08847BLASTN svgBLASTP svg
NC_013282:33896193389619341209922481Cronobacter turicensis, complete genome0731BLASTN svgBLASTP svg
NC_009648:38036223803622385072747106Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome01140BLASTN svgBLASTP svg
NC_020181:51825685182568520953926972Enterobacter aerogenes EA1509E, complete genome01195BLASTN svgBLASTP svg
NC_009801:995396995396101946824073Escherichia coli E24377A, complete genome06504BLASTN svgBLASTP svg
NC_004431:24449722444972246809923128Escherichia coli CFT073, complete genome08716BLASTN svgBLASTP svg
NC_015663:770485*77048579596825484Enterobacter aerogenes KCTC 2190 chromosome, complete genome6e-124452BLASTN svgBLASTP svg
NC_020211:31514583151458317575024293Serratia marcescens WW4, complete genome4e-48200BLASTN svgBLASTP svg
NC_015061:15989201598920163040531486Rahnella sp. Y9602 chromosome, complete genome2e-43184BLASTN svgBLASTP svg
NC_012917:3565268*3565268359123425967Pectobacterium carotovorum subsp. carotovorum PC1, complete genome4e-42180BLASTN svgBLASTP svg
NC_014562:16982531698253172164923397Pantoea vagans C9-1 chromosome, complete genome5e-41176BLASTN svgBLASTP svg
NC_015061:37259213725921375022024300Rahnella sp. Y9602 chromosome, complete genome3e-39170BLASTN svgBLASTP svg
NC_014837:2458780*2458780248745128672Pantoea sp. At-9b chromosome, complete genome5e-38167BLASTN svgBLASTP svg
NC_015061:59624759624762407627830Rahnella sp. Y9602 chromosome, complete genome2e-37165BLASTN svgBLASTP svg
NC_004631:79981079981083168931880Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-35159BLASTN svgBLASTP svg
NC_003198:21796882179688220742827741Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-35159BLASTN svgBLASTP svg
NC_011149:21795922179592220743527844Salmonella enterica subsp. enterica serovar Agona str. SL483,8e-34153BLASTN svgBLASTP svg
NC_006511:79254379254382457832036Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC3e-30141BLASTN svgBLASTP svg
NC_006155:21168342116834213909922266Yersinia pseudotuberculosis IP 32953, complete genome2e-28135BLASTN svgBLASTP svg
NC_006905:22356072235607226436328757Salmonella enterica subsp. enterica serovar Choleraesuis str3e-27131BLASTN svgBLASTP svg
NC_020211:45982174598217463062032404Serratia marcescens WW4, complete genome7e-22113BLASTN svgBLASTP svg
NC_012724:14745414745417238824935Burkholderia glumae BGR1 chromosome 1, complete genome3e-18101BLASTN svgBLASTP svg
NC_014837:37664263766426379523728812Pantoea sp. At-9b chromosome, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_012962:49420004942000496422122222Photorhabdus asymbiotica, complete genome2e-1281.8BLASTN svgBLASTP svg
NC_014306:12447211244721126333018610Erwinia billingiae Eb661, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013956:35257113525711354815922449Pantoea ananatis LMG 20103 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_015061:31112113111211313800526795Rahnella sp. Y9602 chromosome, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_007613:76123476123478018918956Shigella boydii Sb227, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_010498:4072681*4072681409685324173Escherichia coli SMS-3-5, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_011740:448000*44800047065722658Escherichia fergusonii ATCC 35469, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_013508:35930003593000361400721008Edwardsiella tarda EIB202, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_014562:2871765*2871765290090029136Pantoea vagans C9-1 chromosome, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_011149:28021992802199282596423766Salmonella enterica subsp. enterica serovar Agona str. SL483,6e-1073.8BLASTN svgBLASTP svg
NC_010694:61498561498564279627812Erwinia tasmaniensis, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_013508:2870954*2870954288859917646Edwardsiella tarda EIB202, complete genome2e-0971.9BLASTN svgBLASTP svg
NC_010468:49074*490746937320300Escherichia coli ATCC 8739, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_006511:26779642677964270110823145Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC9e-0969.9BLASTN svgBLASTP svg
NC_003198:44534574453457450773054274Salmonella enterica subsp. enterica serovar Typhi str. CT18,9e-0969.9BLASTN svgBLASTP svg
NC_010943:325739*32573934942023682Stenotrophomonas maltophilia K279a, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_021066:53421275342127536560823482Raoultella ornithinolytica B6, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_014306:10354510354513169228148Erwinia billingiae Eb661, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_015856:11520211152021117726325243Collimonas fungivorans Ter331 chromosome, complete genome9e-0660BLASTN svgBLASTP svg
NC_004547:442927*44292748635443428Erwinia carotovora subsp. atroseptica SCRI1043, complete genome9e-0660BLASTN svgBLASTP svg
NC_004547:3866439*3866439389314026702Erwinia carotovora subsp. atroseptica SCRI1043, complete genome9e-0660BLASTN svgBLASTP svg