Pre_GI: BLASTP Hits

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Query: NC_011353:4688000:4698078 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Start: 4698078, End: 4699298, Length: 1221

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:4470932:4482484448248444837041221Escherichia coli O55:H7 str. CB9615 chromosome, complete genomePas0777
NC_013008:4643825:4654119465411946553391221Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system component0777
NC_002655:4653160:4663957466395746651771221Escherichia coli O157:H7 EDL933, complete genomeescD0777
NC_002695:4584177:4594974459497445961941221Escherichia coli O157:H7 str. Sakai, complete genomeEscD0777
NC_011601:4096427:4108906410890641101261221Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS structure protein EscD0771
NC_013361:5319497:5357699535769953589191221Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscD0761
NC_013353:3669500:3684881368488136861011221Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscD0761
AP010958:3669500:3684881368488136861011221Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscD0761
NC_013364:3701895:3726522372652237277421221Escherichia coli O111:H- str. 11128, complete genomeT3SS structure protein EscD0743
NC_014012:2565329:2584524258452425857321209Shewanella violacea DSS12, complete genometype III secretion system apparatus protein, YscD/HrpQ family1e-30134
NC_010067:1507823:1533538153353815347491212Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-1996.7
NC_011083:1476894:1487403148740314886021200Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion apparatus protein, YscD/HrpQ family5e-1892.8
NC_012125:2360815:2383050238305023842491200Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island protein6e-1892.4
NC_016832:1324820:1335328133532813365271200Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Type III secretion apparatus protein, YscD/HrpQ6e-1892.4
NC_003197:1471349:1481876148187614830871212Salmonella typhimurium LT2, complete genomevirulence protein6e-1892.4
NC_016810:1428201:1438728143872814399391212Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island protein6e-1892.4
NC_016856:1481325:1491852149185214930631212Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Svirulence protein6e-1892.4
NC_016857:1428201:1438728143872814399391212Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74virulence protein6e-1892.4
NC_016860:1469066:1479563147956314807741212Salmonella enterica subsp. enterica serovar Typhimurium strvirulence protein6e-1892.4
NC_016863:1429516:1440043144004314412541212Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1virulence protein6e-1892.4
NC_003198:1621347:1643582164358216447931212Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island protein5e-1892.4
NC_006905:1509093:1519619151961915208301212Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system apparatus SsaD5e-1892.4
NC_004631:1325817:1336343133634313375541212Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island protein5e-1892.4
NC_017046:1428272:1438811143881114400101200Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island protein7e-1892
NC_010102:1616530:1638826163882616400371212Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-1891.7
NC_011094:1435347:1445855144585514470541200Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus protein, YscD/HrpQ family protein1e-1791.3
NC_011080:1470794:1481329148132914825281200Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein, YscD/HrpQ family1e-1791.3
NC_011205:1852665:1874900187490018760991200Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus protein, YscD/HrpQ family1e-1791.3
NC_011274:1763676:1785911178591117871221212Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein1e-1791.3
NC_011294:1723852:1746087174608717472981212Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein1e-1791.3
NC_011147:1502096:1524391152439115256021212Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island protein1e-1790.9
NC_006511:1506915:1529210152921015304211212Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island protein1e-1790.9
NC_011149:1710601:1732896173289617340951200Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein, YscD/HrpQ family4e-1789.4
NC_016831:1236786:1247322124732212485211200Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island protein4e-1789.4