Pre_GI: BLASTP Hits

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Query: NC_011353:4688000:4693476 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Start: 4693476, End: 4693697, Length: 222

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:4470932:447788244778824478103222Escherichia coli O55:H7 str. CB9615 chromosome, complete genometype III secretion apparatus needle protein2e-35147
NC_002655:4653160:465935546593554659576222Escherichia coli O157:H7 EDL933, complete genomeescF2e-35147
NC_002695:4584177:459037245903724590593222Escherichia coli O157:H7 str. Sakai, complete genomeEscF2e-35147
AP010958:3669500:368025536802553680476222Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS structure protein EscF2e-35147
NC_011601:4096427:410426041042604104481222Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS structure protein EscF2e-35147
NC_013008:4643825:464951746495174649738222Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III secretion system component2e-35147
NC_013353:3669500:368025536802553680476222Escherichia coli O103:H2 str. 12009, complete genomeT3SS structure protein EscF2e-35147
NC_013361:5319497:536332453633245363545222Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS structure protein EscF2e-35147
NC_013364:3701895:372187937218793722100222Escherichia coli O111:H- str. 11128, complete genomeT3SS structure protein EscF2e-35147
NC_013716:3109700:314826831482683148489222Citrobacter rodentium ICC168, complete genomeT3SS structural protein EscF1e-22105
NC_010067:1507823:152704315270431527258216Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein6e-0959.7
NC_005085:2774370:278730127873012787516216Chromobacterium violaceum ATCC 12472, complete genomesecretion system apparatus2e-0858.2
NC_014012:2565329:257368425736842573899216Shewanella violacea DSS12, complete genometype III secretion system apparatus protein, putative2e-0857.8
NC_006905:1509093:152717415271741527440267Salmonella enterica subsp. enterica serovar Choleraesuis strSecretion system apparatus SsaG6e-0856.2
NC_011094:1435347:145344114534411453656216Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus needle protein6e-0856.2
NC_003197:1471349:148953714895371489752216Salmonella typhimurium LT2, complete genometype III secretion system apparatus protein6e-0856.2
NC_004631:1325817:134394313439431344158216Salmonella enterica subsp. enterica serovar Typhi Ty2, completeputative pathogenicity island protein6e-0856.2
NC_011149:1710601:172623217262321726447216Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus needle protein6e-0856.2
NC_011080:1470794:148897714889771489192216Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus needle protein6e-0856.2
NC_006511:1506915:152254615225461522761216Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative pathogenicity island protein6e-0856.2
NC_010102:1616530:163216116321611632376216Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-0856.2
NC_003198:1621347:163697816369781637193216Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative pathogenicity island protein6e-0856.2
NC_011083:1476894:149505214950521495267216Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,type III secretion apparatus needle protein6e-0856.2
NC_011147:1502096:151772715177271517942216Salmonella enterica subsp. enterica serovar Paratyphi A strpathogenicity island protein6e-0856.2
NC_011205:1852665:186829618682961868511216Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus needle protein6e-0856.2
NC_011274:1763676:177930717793071779522216Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91pathogenicity island protein6e-0856.2
NC_017046:1428272:144646014464601446675216Salmonella enterica subsp. enterica serovar Typhimurium str. 798pathogenicity island protein6e-0856.2
NC_016863:1429516:144770414477041447919216Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1type III secretion system apparatus protein6e-0856.2
NC_016860:1469066:148722414872241487439216Salmonella enterica subsp. enterica serovar Typhimurium strsecretion system apparatus protein SsaG6e-0856.2
NC_016857:1428201:144638914463891446604216Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74secretion system apparatus protein SsaG6e-0856.2
NC_016856:1481325:149951314995131499728216Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Stype III secretion system apparatus protein6e-0856.2
NC_016832:1324820:134291613429161343131216Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Type III secretion apparatus needle protein6e-0856.2
NC_016831:1236786:125491012549101255125216Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative pathogenicity island protein6e-0856.2
NC_016810:1428201:144638914463891446604216Salmonella enterica subsp. enterica serovar Typhimurium strputative pathogenicity island protein6e-0856.2
NC_012125:2360815:237644623764462376661216Salmonella enterica subsp. enterica serovar Paratyphi C strainpathogenicity island protein6e-0856.2
NC_011294:1723852:173948317394831739698216Salmonella enterica subsp. enterica serovar Enteritidis strpathogenicity island protein6e-0856.2
NC_012779:916000:933086933086933307222Edwardsiella ictaluri 93-146, complete genometype III secretion apparatus needle protein, putative1e-0652