Pre_GI: BLASTP Hits

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Query: NC_011353:4688000:4692361 Escherichia coli O157:H7 str. EC4115 chromosome, complete genome

Start: 4692361, End: 4692798, Length: 438

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is associated with Hamburger disease, which is caused by the contamination of meat products by enterohemorrhagic E. coli (EHEC). The identifier O157:H7 refers to the serotype of EHEC, and reflects the specific antigenic markers found on the surface of the cell. EHEC attaches and effaces to cells in the large intestine. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013008:4643825:464840246484024649148747Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLEE-encoded type III effector1e-63241
NC_002695:4584177:458925745892574590003747Escherichia coli O157:H7 str. Sakai, complete genomeEspF1e-63241
NC_002655:4653160:465824046582404658986747Escherichia coli O157:H7 EDL933, complete genomeespF1e-63241
NC_013941:4470932:447674944767494477513765Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeespF2e-62237
NC_013364:3701895:372061137206113721399789Escherichia coli O111:H- str. 11128, complete genomeT3SS secreted effector EspF4e-41166
NC_013716:3109700:314688131468813147786906Citrobacter rodentium ICC168, complete genomeT3SS effector protein EspF2e-35147
NC_013353:3669500:367887136788713679755885Escherichia coli O103:H2 str. 12009, complete genomeT3SS effector EspF1e-34144
AP010958:3669500:367887136788713679755885Escherichia coli O103:H2 str. 12009 DNA, complete genomeT3SS secreted effector EspF1e-34144
NC_011601:4096427:410327141032714103891621Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeLEE-encoded effector EspF8e-33139
NC_013361:5319497:536404553640455364668624Escherichia coli O26:H11 str. 11368 chromosome, complete genomeT3SS effector EspF2e-27120