Some Help

Query: NC_011294:4560902:4566409 Salmonella enterica subsp. enterica serovar Enteritidis str

Start: 4566409, End: 4566504, Length: 96

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella enterica subsp. enterica serovar Enteriditis str. P125109 is a virulent phage type 4 strain. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013941:5192500:519570751957075196612906Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeprophage P4 integrase1e-0961.6
NC_013008:5382917:538715153871515388056906Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeintegrase1e-0961.6
NC_002655:5382557:538744553874455388350906Escherichia coli O157:H7 EDL933, complete genomepartial putative integrase1e-0961.6
NC_011353:5426793:543116854311685431995828Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeprophage P4 integrase1e-0961.6
NC_002695:5352554:535752053575205358347828Escherichia coli O157:H7 str. Sakai, complete genomeputative integrase1e-0961.6
NC_011274:4538722:45442294544229454432193Salmonella enterica subsp. enterica serovar Gallinarum str. 287/912e-0961.2
CP002185:4750571:4754674475467447559421269Escherichia coli W, complete genome4e-0960.1
NC_013421:1505176:1519062151906215202761215Pectobacterium wasabiae WPP163, complete genomeintegrase family protein6e-0649.7