Pre_GI: BLASTN Hits

Some Help

Query: NC_011283:4212000 Klebsiella pneumoniae 342 chromosome, complete genome

Start: 4212000, End: 4230330, Length: 18331

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Klebsiella pneumoniae 342 was isolated from the stem tissue of Zea mays. This strain fixes atmospheric nitrogen and may be able to provide nitrogen, in the form of ammonia, to plant cells. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015663:47674434767443479659929157Enterobacter aerogenes KCTC 2190 chromosome, complete genome0726BLASTN svgBLASTP svg
NC_021066:2226826*2226826225422627401Raoultella ornithinolytica B6, complete genome0724BLASTN svgBLASTP svg
NC_011080:2761403*2761403277959918197Salmonella enterica subsp. enterica serovar Newport str. SL254,0708BLASTN svgBLASTP svg
NC_013850:1887556*1887556193878551230Klebsiella variicola At-22 chromosome, complete genome7e-142511BLASTN svgBLASTP svg
NC_011740:27699612769961278959919639Escherichia fergusonii ATCC 35469, complete genome2e-53218BLASTN svgBLASTP svg
NC_011751:643976*64397666569121716Escherichia coli UMN026 chromosome, complete genome4e-51210BLASTN svgBLASTP svg
NC_015663:45221094522109454904226934Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-38168BLASTN svgBLASTP svg
NC_011748:82436782436784378119415Escherichia coli 55989, complete genome8e-37163BLASTN svgBLASTP svg
CU928145:82436782436784378119415Escherichia coli 55989 chromosome, complete genome8e-37163BLASTN svgBLASTP svg
NC_014306:35249803524980358375158772Erwinia billingiae Eb661, complete genome1e-29139BLASTN svgBLASTP svg
NC_020063:2565605*2565605259927233668Enterobacteriaceae bacterium strain FGI 57, complete genome3e-24121BLASTN svgBLASTP svg
NC_007434:1712000*1712000180122589226Burkholderia pseudomallei 1710b chromosome I, complete sequence4e-20107BLASTN svgBLASTP svg
NC_012214:2805297*2805297283239127095Erwinia pyrifoliae Ep1/96, complete genome6e-19103BLASTN svgBLASTP svg
NC_009792:17701061770106179490624801Citrobacter koseri ATCC BAA-895, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_014562:469154*46915449304023887Pantoea vagans C9-1 chromosome, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_013282:12009931200993124927948287Cronobacter turicensis, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_011740:27374672737467275914021674Escherichia fergusonii ATCC 35469, complete genome4e-1487.7BLASTN svgBLASTP svg
AC_000091:55892055892058720428285Escherichia coli W3110 DNA, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_000913:558920*55892058509926180Escherichia coli K12, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_010473:498252*49825252418825937Escherichia coli str. K-12 substr. DH10B, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_011750:527470*52747055213724668Escherichia coli IAI39 chromosome, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_014306:1286248*1286248131002823781Erwinia billingiae Eb661, complete genome6e-1383.8BLASTN svgBLASTP svg
NC_007650:11923101192310122299130682Burkholderia thailandensis E264 chromosome II, complete sequence2e-1281.8BLASTN svgBLASTP svg
NC_014838:21800021800024009922100Pantoea sp. At-9b plasmid pPAT9B01, complete sequence9e-1279.8BLASTN svgBLASTP svg
NC_009648:1541699*1541699160010958411Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_004741:310382*31038233778027399Shigella flexneri 2a str. 2457T, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_004337:309833*30983333864628814Shigella flexneri 2a str. 301, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_010634:2124185*2124185214874924565Yersinia pseudotuberculosis PB1/+, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_013850:21823372182337224909966763Klebsiella variicola At-22 chromosome, complete genome1e-1075.8BLASTN svgBLASTP svg
NC_007712:1182518*1182518121806435547Sodalis glossinidius str. 'morsitans', complete genome6e-1073.8BLASTN svgBLASTP svg
NC_011083:374000*37400039609922100Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-0971.9BLASTN svgBLASTP svg
NC_007712:15165891516589154609929511Sodalis glossinidius str. 'morsitans', complete genome2e-0971.9BLASTN svgBLASTP svg
NC_013850:985331985331100742022090Klebsiella variicola At-22 chromosome, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_006905:368942*36894239327424333Salmonella enterica subsp. enterica serovar Choleraesuis str1e-0765.9BLASTN svgBLASTP svg
NC_011894:36711623671162369484723686Methylobacterium nodulans ORS 2060, complete genome5e-0763.9BLASTN svgBLASTP svg