Pre_GI: BLASTN Hits

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Query: NC_011283:105245 Klebsiella pneumoniae 342 chromosome, complete genome

Start: 105245, End: 127964, Length: 22720

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Klebsiella pneumoniae 342 was isolated from the stem tissue of Zea mays. This strain fixes atmospheric nitrogen and may be able to provide nitrogen, in the form of ammonia, to plant cells. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012913:2189862*2189862221535925498Aggregatibacter aphrophilus NJ8700, complete genome8e-19103BLASTN svgBLASTP svg
NC_018691:198909*19890923147832570Alcanivorax dieselolei B5 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_012721:16359991635999166922033222Burkholderia glumae BGR1 chromosome 2, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007963:35740003574000359672322724Chromohalobacter salexigens DSM 3043, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009792:46589094658909468286123953Citrobacter koseri ATCC BAA-895, complete genome01076BLASTN svgBLASTP svg
NC_013716:4306695*4306695439827491580Citrobacter rodentium ICC168, complete genome1e-128468BLASTN svgBLASTP svg
NC_013716:44082014408201443527827078Citrobacter rodentium ICC168, complete genome2e-99371BLASTN svgBLASTP svg
NC_020260:4029951*4029951405110621156Cronobacter sakazakii Sp291, complete genome0854BLASTN svgBLASTP svg
NC_014500:46919154691915472059528681Dickeya dadantii 3937 chromosome, complete genome2e-72281BLASTN svgBLASTP svg
NC_012880:13550813550816052825021Dickeya dadantii Ech703, complete genome4e-45190BLASTN svgBLASTP svg
NC_013508:26348*263485519528848Edwardsiella tarda EIB202, complete genome5e-97363BLASTN svgBLASTP svg
NC_013508:63914639148559921686Edwardsiella tarda EIB202, complete genome2e-74287BLASTN svgBLASTP svg
NC_009778:40140264014026404423330208Enterobacter sakazakii ATCC BAA-894, complete genome0862BLASTN svgBLASTP svg
NC_020063:974369743612048123046Enterobacteriaceae bacterium strain FGI 57, complete genome2e-105391BLASTN svgBLASTP svg
NC_013961:73037*7303710749134455Erwinia amylovora, complete genome6e-146525BLASTN svgBLASTP svg
NC_004547:164000*16400019143427435Erwinia carotovora subsp. atroseptica SCRI1043, complete genome5e-131476BLASTN svgBLASTP svg
NC_004547:13850013850015906820569Erwinia carotovora subsp. atroseptica SCRI1043, complete genome1e-94355BLASTN svgBLASTP svg
NC_010694:63654*636548609922446Erwinia tasmaniensis, complete genome7e-161575BLASTN svgBLASTP svg
NC_008253:3896704*3896704392023823535Escherichia coli 536, complete genome01102BLASTN svgBLASTP svg
CU928145:4167043*4167043419159624554Escherichia coli 55989 chromosome, complete genome01110BLASTN svgBLASTP svg
NC_011748:4167043*4167043419159624554Escherichia coli 55989, complete genome01110BLASTN svgBLASTP svg
NC_008563:40835584083558410710723550Escherichia coli APEC O1, complete genome01100BLASTN svgBLASTP svg
NC_010468:80000*8000010593725938Escherichia coli ATCC 8739, complete genome0912BLASTN svgBLASTP svg
NC_004431:4223232*4223232424609922868Escherichia coli CFT073, complete genome01114BLASTN svgBLASTP svg
NC_009801:4108179*4108179413170423526Escherichia coli E24377A, complete genome01110BLASTN svgBLASTP svg
NC_009800:3821824*3821824384534923526Escherichia coli HS, complete genome01124BLASTN svgBLASTP svg
CU928160:3862935*3862935388577322839Escherichia coli IAI1 chromosome, complete genome01124BLASTN svgBLASTP svg
NC_011750:4307166*4307166433102623861Escherichia coli IAI39 chromosome, complete genome01126BLASTN svgBLASTP svg
NC_000913:3786124*3786124381459928476Escherichia coli K12, complete genome01110BLASTN svgBLASTP svg
CP002516:88500*8850011436625867Escherichia coli KO11, complete genome0787BLASTN svgBLASTP svg
AP010958:4668181*4668181469259924419Escherichia coli O103:H2 str. 12009 DNA, complete genome01110BLASTN svgBLASTP svg
NC_002655:4606000*4606000462939223393Escherichia coli O157:H7 EDL933, complete genome01108BLASTN svgBLASTP svg
NC_002695:4537000*4537000455962722628Escherichia coli O157:H7 str. Sakai, complete genome01116BLASTN svgBLASTP svg
NC_010498:4031500*4031500405311121612Escherichia coli SMS-3-5, complete genome01120BLASTN svgBLASTP svg
NC_010473:3883701*3883701391159927899Escherichia coli str. K-12 substr. DH10B, complete genome01110BLASTN svgBLASTP svg
NC_011751:4251296*4251296427504623751Escherichia coli UMN026 chromosome, complete genome01114BLASTN svgBLASTP svg
NC_007946:4050762*4050762407361822857Escherichia coli UTI89, complete genome01108BLASTN svgBLASTP svg
CP002185:3998112*3998112402163723526Escherichia coli W, complete genome01124BLASTN svgBLASTP svg
AC_000091:3827856*3827856385515527300Escherichia coli W3110 DNA, complete genome01110BLASTN svgBLASTP svg
NC_011740:4007000*4007000403180124802Escherichia fergusonii ATCC 35469, complete genome01116BLASTN svgBLASTP svg
NC_014828:2657623*2657623268107823456Ethanoligenens harbinense YUAN-3 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014666:71527827152782717565722876Frankia sp. EuI1c chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014973:1257625*1257625128014722523Geobacter sp. M18 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014532:3967463*3967463399309925637Halomonas elongata DSM 2581, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_009648:4359875*4359875438125321379Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome010090BLASTN svgBLASTP svg
NC_013850:109500*10950013209922600Klebsiella variicola At-22 chromosome, complete genome020110BLASTN svgBLASTP svg
NC_007947:290864*29086430939718534Methylobacillus flagellatus KT, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013956:43263884326388435118724800Pantoea ananatis LMG 20103 chromosome, complete genome1e-116428BLASTN svgBLASTP svg
NC_012917:46464914646491466766521175Pectobacterium carotovorum subsp. carotovorum PC1, complete genome1e-103385BLASTN svgBLASTP svg
NC_013421:4790696*4790696482022829533Pectobacterium wasabiae WPP163, complete genome2e-133484BLASTN svgBLASTP svg
NC_008609:2446246*2446246249438248137Pelobacter propionicus DSM 2379, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_005126:274000*27400029651122512Photorhabdus luminescens subsp. laumondii TTO1, complete genome1e-54222BLASTN svgBLASTP svg
NC_007912:4661141*4661141468409922959Saccharophagus degradans 2-40, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010067:38469623846962387119224231Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-74287BLASTN svgBLASTP svg
NC_011149:3822000*3822000384676224763Salmonella enterica subsp. enterica serovar Agona str. SL483,01023BLASTN svgBLASTP svg
NC_006905:3845000*3845000386969524696Salmonella enterica subsp. enterica serovar Choleraesuis str01015BLASTN svgBLASTP svg
NC_011083:3915500*3915500393961024111Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,01015BLASTN svgBLASTP svg
NC_011080:3875320*3875320390054525226Salmonella enterica subsp. enterica serovar Newport str. SL254,01023BLASTN svgBLASTP svg
NC_006511:3690828*3690828371609925272Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC01015BLASTN svgBLASTP svg
NC_010102:38515003851500387645224953Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,01023BLASTN svgBLASTP svg
NC_003198:3924952*3924952395155226601Salmonella enterica subsp. enterica serovar Typhi str. CT18,01015BLASTN svgBLASTP svg
NC_004631:3910451*3910451393705126601Salmonella enterica subsp. enterica serovar Typhi Ty2, complete01015BLASTN svgBLASTP svg
NC_003197:3902500*3902500392838425885Salmonella typhimurium LT2, complete genome01023BLASTN svgBLASTP svg
NC_020064:4751097*4751097477659925503Serratia marcescens FGI94, complete genome3e-157563BLASTN svgBLASTP svg
NC_009832:5369566*5369566539353223967Serratia proteamaculans 568, complete genome2e-109404BLASTN svgBLASTP svg
NC_008700:367949*36794939264724699Shewanella amazonensis SB2B, complete genome9e-31143BLASTN svgBLASTP svg
NC_010658:3774110*3774110379937225263Shigella boydii CDC 3083-94, complete genome01108BLASTN svgBLASTP svg
NC_007613:3637832*3637832366214824317Shigella boydii Sb227, complete genome01108BLASTN svgBLASTP svg
NC_007606:3784847*3784847380859923753Shigella dysenteriae Sd197, complete genome01106BLASTN svgBLASTP svg
NC_004741:3992384*3992384401736124978Shigella flexneri 2a str. 2457T, complete genome01124BLASTN svgBLASTP svg
NC_004337:3761865*3761865378609924235Shigella flexneri 2a str. 301, complete genome01116BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome01116BLASTN svgBLASTP svg
NC_008258:3995553*3995553402149425942Shigella flexneri 5 str. 8401, complete genome01116BLASTN svgBLASTP svg
NC_007384:3956465*3956465398127224808Shigella sonnei Ss046, complete genome7e-81309BLASTN svgBLASTP svg
NC_013456:21215021215023428822139Vibrio sp. Ex25 chromosome 1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_013355:13322631332263135674524483Zymomonas mobilis subsp. mobilis NCIB 11163, complete genome4e-0867.9BLASTN svgBLASTP svg