Pre_GI: BLASTP Hits

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Query: NC_011283:2185462:2199912 Klebsiella pneumoniae 342 chromosome, complete genome

Start: 2199912, End: 2201483, Length: 1572

Host Lineage: Klebsiella pneumoniae; Klebsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Klebsiella pneumoniae 342 was isolated from the stem tissue of Zea mays. This strain fixes atmospheric nitrogen and may be able to provide nitrogen, in the form of ammonia, to plant cells. This organism is the most medically important organism within the genus Klebsiella. It is an environmental organism found in water, soil, and on the surface of plants. Several strains have been isolated from plant tissues and are nitrogen-fixing endophytes that may be a source of nitrogen for the plant. Other strains can become opportunistic pathogens which infect humans, and typically causes hospital-acquired infections in immunocompromised patients. Major sites of infection include the lungs, where it causes a type of pneumonia, and urinary tract infections. Klebsiella can also enter the bloodstream (bacterimia) and cause sepsis. The pathogen can also infect animals and cause inflammation of the uterus in horses as well as more generalized infections in other mammals. This organism expresses numerous pathogenicity factors, including multiple adhesins, capsular polysaccharide, siderophores, and lipopolysaccharide for the evasion of host defenses. The multiple antibiotic resistance genes carried on the chromosome inhibit efforts to clear the organism from infected patients via antibiotic use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013850:2103469:2133323213332321348941572Klebsiella variicola At-22 chromosome, complete genomeResolvase domain protein01009
NC_009801:1392696:1412677141267714141971521Escherichia coli E24377A, complete genomeputative recombinase2e-155549
NC_007384:2007467:2008715200871520102351521Shigella sonnei Ss046, complete genomehypothetical bacteriophage protein1e-151536
NC_004547:2810151:2825271282527128268811611Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative integrase/recombinase2e-51203
NC_011415:600375:6208596208596223851527Escherichia coli SE11 chromosome, complete genomeputative phage recombinase2e-41170
NC_011748:824367:8316568316568331821527Escherichia coli 55989, complete genomeputative site-specific invertase; DLP12 prophage5e-41169
CU928145:824367:8316568316568331821527Escherichia coli 55989 chromosome, complete genomeputative site-specific invertase; DLP12 prophage5e-41169
AC_000091:558920:5681255681255696511527Escherichia coli W3110 DNA, complete genomepredicted recombinase8e-41168
NC_000913:558920:5681255681255696511527Escherichia coli K12, complete genomeDLP12 prophage; predicted recombinase8e-41168
NC_010473:498252:5074575074575089831527Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; predicted recombinase8e-41168
NC_011353:2957962:2968757296875729702831527Escherichia coli O157:H7 str. EC4115 chromosome, complete genomerecombinase family protein8e-41168
NC_012759:461680:4708854708854724111527Escherichia coli BW2952 chromosome, complete genomeDLP12 prophage; putative recombinase8e-41168
NC_012947:3231893:3243361324336132448871527Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeRecombinase8e-41168
NC_012967:531000:5407925407925423181527Escherichia coli B str. REL606 chromosome, complete genomeputative recombinase8e-41168
NC_013008:2910567:2923628292362829251541527Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDLP12 prophage recombinase8e-41168
NC_013941:699286:7082487082487097741527Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDLP12 prophage; recombinase8e-41168
NC_007384:1086025:1089944108994410911881245Shigella sonnei Ss046, complete genomehypothetical protein7e-31135
NC_016812:4246542:4250124425012442512931170Sinorhizobium fredii HH103, complete genomesite-specific recombinase2e-28127
NC_007519:2773000:2776921277692127788551935Desulfovibrio alaskensis G20 chromosome, complete genomehypothetical protein9e-28125
NC_007492:3954345:3962384396238439639821599Pseudomonas fluorescens PfO-1, complete genomeRecombinase2e-27124
NC_002947:1268089:1281215128121512829061692Pseudomonas putida KT2440, complete genomerecombinase-related protein1e-27124
NC_012559:854507:8853478853478863481002Laribacter hongkongensis HLHK9, complete genomeRecombinase1e-26121
NC_011769:3434744:3450826345082634525981773Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeRecombinase1e-25118
NC_011146:4196652:4202142420214242037791638Geobacter bemidjiensis Bem, complete genomeRecombinase2e-25117
NC_016616:760145:7740577740577757781722Dechlorosoma suillum PS chromosome, complete genomesite-specific recombinase, DNA invertase Pin2e-25117
NC_008463:1912348:1939714193971419412911578Pseudomonas aeruginosa UCBPP-PA14, complete genomepossible recombinase7e-25115
NC_009832:1664238:1681671168167116831821512Serratia proteamaculans 568, complete genomeResolvase domain6e-25115
NC_012988:2455807:2460335246033524620831749Methylobacterium extorquens DM4, complete genomerecombinase3e-24113
NC_007347:3612918:3619050361905036208191770Ralstonia eutropha JMP134 chromosome 1, complete sequenceRecombinase3e-23110
NC_007517:3524715:3540161354016135420291869Geobacter metallireducens GS-15, complete genomeResolvase-like:Recombinase1e-22108
NC_002678:3701500:3705162370516237068981737Mesorhizobium loti MAFF303099, complete genomesite-specific recombinase7e-22105
NC_014006:850763:8565128565128582571746Sphingobium japonicum UT26S chromosome 1, complete genomeinvertase/recombinase like protein7e-2099
NC_011979:646518:6672356672356690941860Geobacter sp. FRC-32, complete genomeRecombinase2e-1997.8
NC_013364:1997891:200295320029532003306354Escherichia coli O111:H- str. 11128, complete genome3e-1997.1
NC_010338:3743000:3747659374765937493741716Caulobacter sp. K31, complete genomeRecombinase4e-1996.7
NC_007614:109000:1135631135631151971635Nitrosospira multiformis ATCC 25196 chromosome 1, completeRecombinase5e-1996.3
NC_020209:4549563:4562999456299945646901692Pseudomonas poae RE*1-1-14, complete genomerecombinase2e-1894.7
NC_018678:1820390:1826786182678618284561671Alteromonas macleodii str. 'English Channel 673' chromosome,site-specific recombinase1e-1791.7
NC_004578:2560473:2566716256671625683201605Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein7e-1789.4
NC_007493:1672163:1704748170474817062771530Rhodobacter sphaeroides 2.4.1 chromosome 1, complete sequenceputative site-specific recombinase1e-1688.2
NC_014393:4775452:4782362478236247839481587Clostridium cellulovorans 743B chromosome, complete genomeResolvase domain1e-1481.6
NC_016077:1944000:1956301195630119578181518Acidaminococcus intestini RyC-MR95 chromosome, complete genomesite-specific recombinase2e-1481.3
NC_014375:1242750:1243226124322612449291704Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomeRecombinase2e-1481.3
NC_009659:3520093:3543028354302835448781851Janthinobacterium sp. Marseille chromosome, complete genomesite-specific recombinase2e-1481.3
NC_011979:773673:7870917870917889321842Geobacter sp. FRC-32, complete genomeRecombinase5e-1479.7
NC_017047:3085000:3123842312384231255751734Rahnella aquatilis HX2 chromosome, complete genomehypothetical protein8e-1479
NC_014246:1402500:1412236141223614137981563Mobiluncus curtisii ATCC 43063 chromosome, complete genomesite-specific recombinase1e-1378.6
NC_016614:1178000:1189433118943311912291797Vibrio sp. EJY3 chromosome 2, complete sequencesite-specific recombinase1e-1378.2
NC_003910:486776:4939534939534959982046Colwellia psychrerythraea 34H, complete genomeputative site-specific recombinase2e-1378.2
NC_005070:1088808:1099790109979011016881899Synechococcus sp. WH 8102, complete genomepossible site-specific recombinase2e-1377.8
NC_014393:1022843:1035656103565610372451590Clostridium cellulovorans 743B chromosome, complete genomeResolvase domain2e-1377.4
NC_010337:2793667:2815262281526228168361575Heliobacterium modesticaldum Ice1, complete genomeDNA recombinase, putative1e-1172
NC_007432:654904:7003617003617017071347Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, site-specific recombinase, resolvase family2e-1170.9
NC_014121:2514544:2525778252577825277872010Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein3e-1170.5
NC_016627:4270949:4288360428836042899281569Clostridium clariflavum DSM 19732 chromosome, complete genomesite-specific recombinase, DNA invertase Pin4e-1170.1
NC_014393:4775452:4783933478393347854381506Clostridium cellulovorans 743B chromosome, complete genomeResolvase domain9e-1168.9
NC_015152:307500:3289623289623313792418Spirochaeta sp. Buddy chromosome, complete genomeresolvase domain9e-1168.9
NC_018870:2316499:2329010232901023305781569Thermacetogenium phaeum DSM 12270 chromosome, complete genomeresolvase1e-1068.6
NC_010003:449192:4643804643804659481569Petrotoga mobilis SJ95, complete genomeResolvase domain1e-1068.6
NC_005070:1331741:1342597134259713446002004Synechococcus sp. WH 8102, complete genomepartial homology to phage recombinase1e-1068.2
NC_016627:4323370:4327812432781243293801569Clostridium clariflavum DSM 19732 chromosome, complete genomesite-specific recombinase, DNA invertase Pin1e-1068.2
NC_008781:2575213:2579464257946425810861623Polaromonas naphthalenivorans CJ2, complete genomeRecombinase1e-1068.2
NC_014828:1987487:1994530199453019961131584Ethanoligenens harbinense YUAN-3 chromosome, complete genomeResolvase domain2e-1067.8
NC_014410:800500:8355538355538371211569Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,Resolvase domain3e-1067.4
NC_020211:2012480:2021007202100720226861680Serratia marcescens WW4, complete genomeputative recombinase, DLP12 prophage3e-1067.4
NC_011898:3367457:3370767337076733723381572Clostridium cellulolyticum H10, complete genomeResolvase domain protein2e-1067.4
NC_016822:1431200:1439276143927614411591884Shigella sonnei 53G, complete genomehypothetical protein9e-1065.5
NC_016077:1876119:1899458189945819010351578Acidaminococcus intestini RyC-MR95 chromosome, complete genomeSite-specific recombinase1e-0965.1
NC_014121:2330451:2335767233576723375361770Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-0964.7
NC_002947:3404000:3412988341298834146131626Pseudomonas putida KT2440, complete genomephage recombinase, putative2e-0861.6
NC_018867:1407163:1415789141578914174561668Dehalobacter sp. CF chromosome, complete genomeputative site-specific recombinase2e-0860.8
NC_015633:1702000:1709920170992017117971878Vibrio anguillarum 775 chromosome chromosome I, complete sequenceSite-specific recombinase4e-0860.1
NC_009706:2673906:2697438269743826990271590Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein4e-0860.1
NC_011837:2605409:2628941262894126305301590Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-0860.1
NC_010337:98974:1140951140951157441650Heliobacterium modesticaldum Ice1, complete genomeresolvase, n-terminal:recombinase, putative9e-0858.9
NC_016633:3069518:3136095313609531376691575Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomesite-specific recombinase, DNA invertase Pin1e-0758.9
NC_018870:757416:8074028074028090751674Thermacetogenium phaeum DSM 12270 chromosome, complete genomeresolvase1e-0758.5
NC_012667:931390:9402429402429419121671Vibrio cholerae MJ-1236 chromosome 2, complete genomehypothetical protein1e-0758.5
NC_010501:908000:9248249248249264701647Pseudomonas putida W619, complete genomeResolvase domain1e-0758.2
NC_018870:2316499:2364714236471423662821569Thermacetogenium phaeum DSM 12270 chromosome, complete genomeresolvase1e-0758.2
NC_021066:3201500:3217811321781132193071497Raoultella ornithinolytica B6, complete genomeputative recombinase, DLP12 prophage2e-0757.8
NC_009706:2673906:2695449269544926970201572Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein3e-0757.4
NC_011837:2605409:2626952262695226285231572Clostridium kluyveri NBRC 12016, complete genomehypothetical protein3e-0757.4
NC_014393:4775452:4836596483659648378281233Clostridium cellulovorans 743B chromosome, complete genomeResolvase domain3e-0757.4
NC_009456:787322:8150358150358166931659Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein3e-0757.4
NC_012583:440420:4472494472494489071659Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein3e-0757.4
NC_014376:2964731:2974851297485129762241374Clostridium saccharolyticum WM1 chromosome, complete genomeResolvase domain protein6e-0756.2
NC_019903:1312843:1331032133103213325941563Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,site-specific recombinase, DNA invertase Pin6e-0756.2
NC_013552:207345:2073452073452090361692Dehalococcoides sp. VS, complete genomeresolvase domain protein, PinR type6e-0756.2
NC_009442:908507:9248809248809264421563Streptococcus suis 05ZYH33 chromosome, complete genomeDNA recombinase8e-0755.8
NC_015697:506494:5307365307365322891554Lactobacillus reuteri SD2112 chromosome, complete genomephage integrase family site-specific recombinase7e-0755.8
NC_015673:1038673:1055311105531110568791569Corynebacterium resistens DSM 45100 chromosome, complete genomeprophage resolvase1e-0655.5
NC_007432:654904:6992176992177004581242Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, site-specific recombinase, resolvase family1e-0655.5
NC_021064:2001786:2010750201075020123061557Propionibacterium avidum 44067, complete genomeresolvase1e-0655.5
NC_016641:2587000:2616256261625626178781623Paenibacillus terrae HPL-003 chromosome, complete genomeSite-specific recombinase1e-0655.1
NC_016048:4163225:4185947418594741875961650Oscillibacter valericigenes Sjm18-20, complete genomeputative recombinase1e-0655.1
NC_010337:98974:1166181166181182281611Heliobacterium modesticaldum Ice1, complete genomeresolvase, n-terminal:recombinase, putative2e-0654.7
NC_014376:3399366:3416589341658934182381650Clostridium saccharolyticum WM1 chromosome, complete genomeResolvase domain protein2e-0654.3
NC_009706:3882500:3890312389031238919611650Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein3e-0653.9
NC_014825:137485:1374851374851391221638Ruminococcus albus 7 plasmid pRUMAL02, complete sequenceResolvase domain4e-0653.5
NC_011837:3814000:3821815382181538233651551Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-0653.5
NC_009455:273519:3106353106353122811647Dehalococcoides sp. BAV1 chromosome, complete genomeresolvase domain-containing protein6e-0652.8
NC_016048:2873669:2896091289609128977101620Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase6e-0652.8