Pre_GI: BLASTN Hits

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Query: NC_011274:311843 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91

Start: 311843, End: 340099, Length: 28257

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella gallinarum is the causative agent of Fowl typhoid, a severe systemic disease of poultry. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010102:27623042762304278909926796Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,024580BLASTN svgBLASTP svg
NC_011080:33312133312135949426374Salmonella enterica subsp. enterica serovar Newport str. SL254,04438BLASTN svgBLASTP svg
NC_011149:30955630955633763728082Salmonella enterica subsp. enterica serovar Agona str. SL483,04417BLASTN svgBLASTP svg
NC_006905:32651732651735159925083Salmonella enterica subsp. enterica serovar Choleraesuis str04371BLASTN svgBLASTP svg
NC_003197:33208633208635504122956Salmonella typhimurium LT2, complete genome02640BLASTN svgBLASTP svg
NC_006511:25405002540500256809927600Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC02500BLASTN svgBLASTP svg
NC_003198:33131433131435709925786Salmonella enterica subsp. enterica serovar Typhi str. CT18,02284BLASTN svgBLASTP svg
AC_000091:27332527332530179728473Escherichia coli W3110 DNA, complete genome0749BLASTN svgBLASTP svg
NC_000913:27207127207130179729727Escherichia coli K12, complete genome0749BLASTN svgBLASTP svg
NC_010473:24742924742927209924671Escherichia coli str. K-12 substr. DH10B, complete genome0749BLASTN svgBLASTP svg
AP010958:52728635272863529459921737Escherichia coli O103:H2 str. 12009 DNA, complete genome4e-160573BLASTN svgBLASTP svg
NC_011083:33891033891036299924090Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-158567BLASTN svgBLASTP svg
NC_004431:23042802304280233659932320Escherichia coli CFT073, complete genome4e-123450BLASTN svgBLASTP svg
NC_007946:21554542155454218077025317Escherichia coli UTI89, complete genome4e-123450BLASTN svgBLASTP svg
NC_008253:20567342056734207917122438Escherichia coli 536, complete genome4e-123450BLASTN svgBLASTP svg
NC_009792:80833280833283532926998Citrobacter koseri ATCC BAA-895, complete genome4e-123450BLASTN svgBLASTP svg
NC_020181:42194142194144800526065Enterobacter aerogenes EA1509E, complete genome4e-123450BLASTN svgBLASTP svg
NC_012779:91600091600093379317794Edwardsiella ictaluri 93-146, complete genome5e-116426BLASTN svgBLASTP svg
NC_011149:46774124677412471244835037Salmonella enterica subsp. enterica serovar Agona str. SL483,3e-111410BLASTN svgBLASTP svg
NC_015663:113797137971Enterobacter aerogenes KCTC 2190 chromosome, complete genome8e-109402BLASTN svgBLASTP svg
NC_004631:26159082615908263824422337Salmonella enterica subsp. enterica serovar Typhi Ty2, complete1e-107398BLASTN svgBLASTP svg
NC_013956:32733403273340330380130462Pantoea ananatis LMG 20103 chromosome, complete genome2e-106394BLASTN svgBLASTP svg
NC_020181:51305135130513517631045798Enterobacter aerogenes EA1509E, complete genome5e-104387BLASTN svgBLASTP svg
NC_011083:2847318*2847318291739170074Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-103385BLASTN svgBLASTP svg
NC_003197:2894344*2894344294288048537Salmonella typhimurium LT2, complete genome2e-103385BLASTN svgBLASTP svg
NC_012779:26648492664849268361918771Edwardsiella ictaluri 93-146, complete genome8e-75289BLASTN svgBLASTP svg
NC_020064:79422*7942212524145820Serratia marcescens FGI94, complete genome5e-73283BLASTN svgBLASTP svg
NC_020064:3157656*3157656318828830633Serratia marcescens FGI94, complete genome5e-73283BLASTN svgBLASTP svg
NC_020064:3825916*3825916385292327008Serratia marcescens FGI94, complete genome5e-73283BLASTN svgBLASTP svg
NC_020064:1409596*1409596145680247207Serratia marcescens FGI94, complete genome5e-73283BLASTN svgBLASTP svg
NC_002695:53525545352554537663924086Escherichia coli O157:H7 str. Sakai, complete genome7e-32147BLASTN svgBLASTP svg
NC_002655:53825575382557540664224086Escherichia coli O157:H7 EDL933, complete genome7e-32147BLASTN svgBLASTP svg
NC_008313:69169269169271552323832Ralstonia eutropha H16 chromosome 1, complete sequence2e-29139BLASTN svgBLASTP svg
NC_004431:43191524319152434223723086Escherichia coli CFT073, complete genome3e-28135BLASTN svgBLASTP svg
NC_007946:48759974875997491969643700Escherichia coli UTI89, complete genome3e-28135BLASTN svgBLASTP svg
NC_008253:48178644817864486276044897Escherichia coli 536, complete genome3e-28135BLASTN svgBLASTP svg
NC_015663:18690001869000191219543196Enterobacter aerogenes KCTC 2190 chromosome, complete genome4e-27131BLASTN svgBLASTP svg
NC_015968:4790239*4790239481349923261Enterobacter asburiae LF7a chromosome, complete genome2e-26129BLASTN svgBLASTP svg
NC_011750:47757704775770480021124442Escherichia coli IAI39 chromosome, complete genome7e-26127BLASTN svgBLASTP svg
NC_010086:87172387172390117629454Burkholderia multivorans ATCC 17616 chromosome 2, complete3e-25125BLASTN svgBLASTP svg
NC_010805:15767351576735160409927365Burkholderia multivorans ATCC 17616 chromosome 2, complete3e-25125BLASTN svgBLASTP svg
NC_008563:47078264707826473072322898Escherichia coli APEC O1, complete genome2e-23119BLASTN svgBLASTP svg
NC_011750:43900004390000444275952760Escherichia coli IAI39 chromosome, complete genome2e-23119BLASTN svgBLASTP svg
NC_015563:33090973309097334276333667Delftia sp. Cs1-4 chromosome, complete genome6e-23117BLASTN svgBLASTP svg
NC_008253:31613113161311320913747827Escherichia coli 536, complete genome6e-23117BLASTN svgBLASTP svg
NC_012721:18296518296520829525331Burkholderia glumae BGR1 chromosome 2, complete genome3e-22115BLASTN svgBLASTP svg
NC_020064:29218092921809295042328615Serratia marcescens FGI94, complete genome4e-21111BLASTN svgBLASTP svg
NC_012917:32411963241196329451553320Pectobacterium carotovorum subsp. carotovorum PC1, complete genome4e-21111BLASTN svgBLASTP svg
NC_010002:42566514256651428631629666Delftia acidovorans SPH-1, complete genome2e-20109BLASTN svgBLASTP svg
NC_011751:35309543530954356883437881Escherichia coli UMN026 chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_011083:45478254547825460814560321Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,1e-18103BLASTN svgBLASTP svg
NC_011149:11106421110642113231521674Salmonella enterica subsp. enterica serovar Agona str. SL483,4e-18101BLASTN svgBLASTP svg
NC_006905:13424741342474137811135638Salmonella enterica subsp. enterica serovar Choleraesuis str4e-18101BLASTN svgBLASTP svg
NC_020260:603796*60379665197748182Cronobacter sakazakii Sp291, complete genome2e-1799.6BLASTN svgBLASTP svg
AC_000091:2747520*2747520280214854629Escherichia coli W3110 DNA, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_000913:2746886*2746886280151454629Escherichia coli K12, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010473:2839902*2839902288978149880Escherichia coli str. K-12 substr. DH10B, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009648:14876921487692151904531354Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_014306:3006028*3006028304213136104Erwinia billingiae Eb661, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013421:385930*38593040496119032Pectobacterium wasabiae WPP163, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_010694:3178842*3178842319909920258Erwinia tasmaniensis, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_014121:37769023776902380024423343Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-1385.7BLASTN svgBLASTP svg
NC_020260:88230788230791401031704Cronobacter sakazakii Sp291, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_013961:441719*44171947879337075Erwinia amylovora, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_008391:27125427125429909927846Burkholderia cepacia AMMD chromosome 2, complete sequence9e-1383.8BLASTN svgBLASTP svg
NC_007511:10940501094050112124627197Burkholderia sp. 383 chromosome 2, complete sequence4e-1281.8BLASTN svgBLASTP svg
NC_007511:17805001780500180270922210Burkholderia sp. 383 chromosome 2, complete sequence4e-1281.8BLASTN svgBLASTP svg
NC_012214:12126161212616123625023635Erwinia pyrifoliae Ep1/96, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_013592:32128343212834324883336000Dickeya dadantii Ech586, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_009078:142794*14279417264129848Burkholderia pseudomallei 1106a chromosome II, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_007435:19811641981164201096229799Burkholderia pseudomallei 1710b chromosome II, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_006351:14278814278817240329616Burkholderia pseudomallei K96243 chromosome 2, complete sequence1e-1179.8BLASTN svgBLASTP svg
NC_013592:446092*44609246819222101Dickeya dadantii Ech586, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014306:67988867988870467824791Erwinia billingiae Eb661, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015061:31112113111211313800526795Rahnella sp. Y9602 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_014121:18228951822895184662423730Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete2e-1075.8BLASTN svgBLASTP svg
NC_013716:5201097*5201097527659975503Citrobacter rodentium ICC168, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010634:13423931342393136733024938Yersinia pseudotuberculosis PB1/+, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004741:3041294*3041294310468963396Shigella flexneri 2a str. 2457T, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004337:3049118*3049118311609966982Shigella flexneri 2a str. 301, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006155:3805640*3805640384073735098Yersinia pseudotuberculosis IP 32953, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_010634:3720214*3720214375380933596Yersinia pseudotuberculosis PB1/+, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_021066:46029246029251915858867Raoultella ornithinolytica B6, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_015663:41296854129685415207222388Enterobacter aerogenes KCTC 2190 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_012912:10536181053618108982736210Dickeya zeae Ech1591, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_004431:3409389*3409389349493685548Escherichia coli CFT073, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_015224:2095816*2095816211873722922Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,5e-0867.9BLASTN svgBLASTP svg
NC_008149:3556999*3556999359064933651Yersinia pestis Nepal516, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006905:22356072235607226436328757Salmonella enterica subsp. enterica serovar Choleraesuis str2e-0765.9BLASTN svgBLASTP svg
NC_005810:39172543917254395265235399Yersinia pestis biovar Microtus str. 91001, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004088:3689000*3689000372277733778Yersinia pestis KIM, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003143:1059580*1059580109467535096Yersinia pestis CO92, complete genome2e-0765.9BLASTN svgBLASTP svg
CP002516:44744*447447499130248Escherichia coli KO11, complete genome2e-0765.9BLASTN svgBLASTP svg
CP002185:4035502*4035502406409928598Escherichia coli W, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008150:31790331790335159933697Yersinia pestis Antiqua, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009832:33130583313058333643323376Serratia proteamaculans 568, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015663:1356982*1356982138951032529Enterobacter aerogenes KCTC 2190 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014837:2709813*2709813273364723835Pantoea sp. At-9b chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013850:4829455*4829455485950430050Klebsiella variicola At-22 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012779:29570002957000298403927040Edwardsiella ictaluri 93-146, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010465:89392189392191618522265Yersinia pseudotuberculosis YPIII, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010159:17246917246919591323445Yersinia pestis Angola, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010067:25297502529750259435464605Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-0765.9BLASTN svgBLASTP svg
NC_009079:40289140289142220419314Burkholderia mallei NCTC 10247 chromosome I, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_008835:18279051827905185016122257Burkholderia mallei NCTC 10229 chromosome I, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_008536:2961460*2961460298496123502Solibacter usitatus Ellin6076, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008253:334467*33446741611981653Escherichia coli 536, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_006349:40080740080742001219206Burkholderia mallei ATCC 23344 chromosome 2, complete sequence8e-0763.9BLASTN svgBLASTP svg
NC_013592:80428880428883459430307Dickeya dadantii Ech586, complete genome3e-0661.9BLASTN svgBLASTP svg