Pre_GI: BLASTN Hits

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Query: NC_011274:1094379 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91

Start: 1094379, End: 1124683, Length: 30305

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella gallinarum is the causative agent of Fowl typhoid, a severe systemic disease of poultry. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008782:2568027*2568027262351455488Acidovorax sp. JS42, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_008570:1986466*1986466201051824053Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome2e-97365BLASTN svgBLASTP svg
NC_008570:4009762*4009762403215322392Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome7e-23117BLASTN svgBLASTP svg
NC_009348:3819271*3819271384615626886Aeromonas salmonicida subsp. salmonicida A449, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_018691:24107792410779243591125133Alcanivorax dieselolei B5 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_006322:717953*71795373924121289Bacillus licheniformis ATCC 14580, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_006270:718169*71816974061322445Bacillus licheniformis ATCC 14580, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_008390:40731540731543675629442Burkholderia cepacia AMMD chromosome 1, complete sequence2e-26129BLASTN svgBLASTP svg
NC_008391:27125427125429909927846Burkholderia cepacia AMMD chromosome 2, complete sequence2e-1385.7BLASTN svgBLASTP svg
NC_010804:32439632439635325628861Burkholderia multivorans ATCC 17616 chromosome 1, complete2e-26129BLASTN svgBLASTP svg
NC_010086:87172387172390117629454Burkholderia multivorans ATCC 17616 chromosome 2, complete1e-1283.8BLASTN svgBLASTP svg
NC_010805:15767351576735160409927365Burkholderia multivorans ATCC 17616 chromosome 2, complete1e-1283.8BLASTN svgBLASTP svg
NC_009078:142794*14279417264129848Burkholderia pseudomallei 1106a chromosome II, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_007435:19811641981164201096229799Burkholderia pseudomallei 1710b chromosome II, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_006351:14278814278817240329616Burkholderia pseudomallei K96243 chromosome 2, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_007510:40984340984345009940257Burkholderia sp. 383 chromosome 1, complete sequence8e-32147BLASTN svgBLASTP svg
NC_007511:10940501094050112124627197Burkholderia sp. 383 chromosome 2, complete sequence1e-1283.8BLASTN svgBLASTP svg
NC_007963:2555012*2555012257573920728Chromohalobacter salexigens DSM 3043, complete genome1e-18103BLASTN svgBLASTP svg
NC_013716:1178383*1178383120516726785Citrobacter rodentium ICC168, complete genome01156BLASTN svgBLASTP svg
NC_013282:20260832026083208019854116Cronobacter turicensis, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_010002:42566514256651428631629666Delftia acidovorans SPH-1, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015563:33090973309097334276333667Delftia sp. Cs1-4 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015563:73370473370475607422371Delftia sp. Cs1-4 chromosome, complete genome3e-19105BLASTN svgBLASTP svg
NC_014500:3023762*3023762306170037939Dickeya dadantii 3937 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_013592:1730505*1730505176316532661Dickeya dadantii Ech586, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_013592:14245601424560145021625657Dickeya dadantii Ech586, complete genome6e-79303BLASTN svgBLASTP svg
NC_012880:1765920*1765920184383077911Dickeya dadantii Ech703, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_012912:1788308*1788308184662758320Dickeya zeae Ech1591, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_012779:26198712619871264372223852Edwardsiella ictaluri 93-146, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_012779:996879996879102037523497Edwardsiella ictaluri 93-146, complete genome1e-33153BLASTN svgBLASTP svg
NC_015663:3466471*3466471350514038670Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-116428BLASTN svgBLASTP svg
NC_015968:1709680*1709680173221922540Enterobacter asburiae LF7a chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015968:4117835*4117835416711149277Enterobacter asburiae LF7a chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014121:18228951822895184662423730Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete4e-1281.8BLASTN svgBLASTP svg
NC_014121:2629075*2629075265233623262Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, complete9e-0763.9BLASTN svgBLASTP svg
NC_009778:2227627*2227627228586658240Enterobacter sakazakii ATCC BAA-894, complete genome2e-38168BLASTN svgBLASTP svg
NC_014306:67988867988870467824791Erwinia billingiae Eb661, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_004547:1970686*1970686199651325828Erwinia carotovora subsp. atroseptica SCRI1043, complete genome7e-20107BLASTN svgBLASTP svg
NC_008253:1938975*1938975200160362629Escherichia coli 536, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008563:31192843119284314330124018Escherichia coli APEC O1, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010468:2809125*2809125282748818364Escherichia coli ATCC 8739, complete genome5e-141509BLASTN svgBLASTP svg
NC_004431:2185750*2185750224915063401Escherichia coli CFT073, complete genome2e-1179.8BLASTN svgBLASTP svg
CP002516:3863932*3863932388609922168Escherichia coli KO11, complete genome01568BLASTN svgBLASTP svg
CP002185:234719*23471925468519967Escherichia coli W, complete genome01568BLASTN svgBLASTP svg
AC_000091:1083798*1083798110686123064Escherichia coli W3110 DNA, complete genome5e-141509BLASTN svgBLASTP svg
NC_011740:1991941*1991941201386221922Escherichia fergusonii ATCC 35469, complete genome01663BLASTN svgBLASTP svg
NC_014323:81602781602784169625670Herbaspirillum seropedicae SmR1 chromosome, complete genome8e-32147BLASTN svgBLASTP svg
NC_014323:4619344*4619344465241733074Herbaspirillum seropedicae SmR1 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_007802:4071006*4071006409812727122Jannaschia sp. CCS1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009648:14876921487692151904531354Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_011894:1499229*1499229152597926751Methylobacterium nodulans ORS 2060, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_003112:84400084400086636122362Neisseria meningitidis MC58, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014837:2709813*2709813273364723835Pantoea sp. At-9b chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012917:2921932*2921932295050128570Pectobacterium carotovorum subsp. carotovorum PC1, complete genome4e-21111BLASTN svgBLASTP svg
NC_013421:11435001143500116948625987Pectobacterium wasabiae WPP163, complete genome5e-39170BLASTN svgBLASTP svg
NC_012962:29397629397631522521250Photorhabdus asymbiotica, complete genome2e-47198BLASTN svgBLASTP svg
NC_005126:34965834965840029550638Photorhabdus luminescens subsp. laumondii TTO1, complete genome3e-28135BLASTN svgBLASTP svg
NC_008027:4953432*4953432497941825987Pseudomonas entomophila L48, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008313:69169269169271552323832Ralstonia eutropha H16 chromosome 1, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_007778:4814000*4814000483709923100Rhodopseudomonas palustris HaA2, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010067:1782998*1782998180098317986Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete08013BLASTN svgBLASTP svg
NC_011149:10775891077589110031022722Salmonella enterica subsp. enterica serovar Agona str. SL483,014390BLASTN svgBLASTP svg
NC_011149:1987291*1987291203423646946Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-109404BLASTN svgBLASTP svg
NC_006905:1186895*1186895121502828134Salmonella enterica subsp. enterica serovar Choleraesuis str024660BLASTN svgBLASTP svg
NC_011083:12165001216500123593619437Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,016760BLASTN svgBLASTP svg
NC_011080:12099351209935123471124777Salmonella enterica subsp. enterica serovar Newport str. SL254,024730BLASTN svgBLASTP svg
NC_006511:1770000*1770000179181621817Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC024490BLASTN svgBLASTP svg
NC_010102:1979742*1979742200183422093Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,024930BLASTN svgBLASTP svg
NC_003198:1117687*1117687114274925063Salmonella enterica subsp. enterica serovar Typhi str. CT18,024420BLASTN svgBLASTP svg
NC_004631:1842050*1842050186312621077Salmonella enterica subsp. enterica serovar Typhi Ty2, complete024420BLASTN svgBLASTP svg
NC_003197:12075971207597123259925003Salmonella typhimurium LT2, complete genome024260BLASTN svgBLASTP svg
NC_020064:29218092921809295042328615Serratia marcescens FGI94, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_020211:31514583151458317575024293Serratia marcescens WW4, complete genome0811BLASTN svgBLASTP svg
NC_009832:33130583313058333643323376Serratia proteamaculans 568, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004337:1065609*1065609109071125103Shigella flexneri 2a str. 301, complete genome2e-131478BLASTN svgBLASTP svg
NC_008258:1076922*1076922110024923328Shigella flexneri 5 str. 8401, complete genome2e-131478BLASTN svgBLASTP svg
NC_007384:10860251086025111635930335Shigella sonnei Ss046, complete genome01824BLASTN svgBLASTP svg
NC_018750:37415813741581376849826918Streptomyces venezuelae ATCC 10712, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009720:2143124*2143124216762924506Xanthobacter autotrophicus Py2, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_003919:4568892*4568892459309924208Xanthomonas axonopodis pv. citri str. 306, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_014228:43313274331327435436923043Xenorhabdus nematophila ATCC 19061, complete genome3e-62248BLASTN svgBLASTP svg
NC_010159:17246917246919591323445Yersinia pestis Angola, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010159:31206423120642314771827077Yersinia pestis Angola, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008150:31790331790335159933697Yersinia pestis Antiqua, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008150:84472784472789009945373Yersinia pestis Antiqua, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_005810:14677721467772150509937328Yersinia pestis biovar Microtus str. 91001, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_005810:39172543917254395265235399Yersinia pestis biovar Microtus str. 91001, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_003143:40068844006884402857921696Yersinia pestis CO92, complete genome5e-33151BLASTN svgBLASTP svg
NC_003143:16300001630000167609946100Yersinia pestis CO92, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_003143:1059580*1059580109467535096Yersinia pestis CO92, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_004088:29663312966331300002833698Yersinia pestis KIM, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_004088:3689000*3689000372277733778Yersinia pestis KIM, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008149:3556999*3556999359064933651Yersinia pestis Nepal516, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_008149:28023922802392285367651285Yersinia pestis Nepal516, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_006155:3805640*3805640384073735098Yersinia pseudotuberculosis IP 32953, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_006155:17560001756000179467638677Yersinia pseudotuberculosis IP 32953, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_006155:43028264302826432457921754Yersinia pseudotuberculosis IP 32953, complete genome3e-34155BLASTN svgBLASTP svg
NC_010634:3720214*3720214375380933596Yersinia pseudotuberculosis PB1/+, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_010634:42349324234932425567620745Yersinia pseudotuberculosis PB1/+, complete genome3e-34155BLASTN svgBLASTP svg
NC_010634:17555481755548179542439877Yersinia pseudotuberculosis PB1/+, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010465:89392189392191618522265Yersinia pseudotuberculosis YPIII, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_010465:2582080*2582080260359921520Yersinia pseudotuberculosis YPIII, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_010465:42909542909545249323399Yersinia pseudotuberculosis YPIII, complete genome3e-34155BLASTN svgBLASTP svg