Pre_GI: BLASTP Hits

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Query: NC_011274:2044000:2076447 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91

Start: 2076447, End: 2076743, Length: 297

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella gallinarum is the causative agent of Fowl typhoid, a severe systemic disease of poultry. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:2053991:208531920853192085615297Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-51201
NC_011205:2180598:221233422123342212630297Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-51201
NC_016831:947281:957839957839958135297Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein6e-51199
NC_011601:2139188:214931121493112149607297Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein7e-50195
NC_010067:892729:924213924213924509297Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-49193
NC_004431:2185750:221457122145712214867297Escherichia coli CFT073, complete genomehypothetical protein3e-49193
NC_008253:1938975:196772919677291968025297Escherichia coli 536, complete genomehypothetical protein3e-49193
NC_013716:2139952:216197221619722162268297Citrobacter rodentium ICC168, complete genomehypothetical protein7e-49192
NC_011149:1987291:201546220154622015758297Salmonella enterica subsp. enterica serovar Agona str. SL483,9e-49191