Pre_GI: BLASTP Hits

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Query: NC_011274:2044000:2071980 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91

Start: 2071980, End: 2072771, Length: 792

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella gallinarum is the causative agent of Fowl typhoid, a severe systemic disease of poultry. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004547:1873390:189483718948371895358522Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein1e-50199
NC_011745:2209288:226054622605462261346801Escherichia coli ED1a chromosome, complete genomehypothetical protein4e-77287
NC_011601:2139188:215113121511312151427297Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein2e-47189
NC_011149:1987291:201405220140522014852801Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-118426
NC_011205:2180598:220786722078672208658792Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein2e-129461
NC_011294:2053991:208085220808522081643792Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein5e-130463
NC_016831:947281:961813961813962604792Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-129460