Pre_GI: BLASTP Hits

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Query: NC_011274:1299475:1317254 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91

Start: 1317254, End: 1317391, Length: 138

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella gallinarum is the causative agent of Fowl typhoid, a severe systemic disease of poultry. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:1220526:125307912530791253201123Salmonella enterica subsp. enterica serovar Enteritidis str1e-1685.1
NC_016810:1903426:192017719201771920299123Salmonella enterica subsp. enterica serovar Typhimurium str4e-1476.6
NC_015761:2373967:238093723809372381320384Salmonella bongori NCTC 12419, complete genome9e-0958.9
NC_011740:2859933:286084028608402861706867Escherichia fergusonii ATCC 35469, complete genomeIS3 element protein InsF2e-0858.2
NC_011294:346915:348718348718349128411Salmonella enterica subsp. enterica serovar Enteritidis str3e-0857.4
NC_003197:2894344:291097729109772911843867Salmonella typhimurium LT2, complete genomeputative transposase4e-0857
NC_011083:2847318:288548328854832886349867Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transposase InsF for insertion sequence IS3A/B/C/D/E/fA4e-0857
NC_016856:2896630:293121229312122932078867Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative transposase4e-0857
NC_016863:2844883:287946528794652880331867Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative transposase4e-0857
NC_016860:2917910:293454329345432935409867Salmonella enterica subsp. enterica serovar Typhimurium strIS3 transposase InsF3e-0857
NC_011205:371001:372687372687373214528Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853transposase3e-0857
NC_011149:1110642:112259011225901123456867Salmonella enterica subsp. enterica serovar Agona str. SL483,ISEc16, orfB4e-0856.6
NC_010468:2809125:281459028145902815456867Escherichia coli ATCC 8739, complete genomeIntegrase catalytic region9e-0855.8
CP002516:1165726:117256111725611173427867Escherichia coli KO11, complete genomeIntegrase catalytic region9e-0855.8
CU928159:30700:341503415035016867Escherichia coli str. 55989 plasmid 55989p, complete genometransposase ORF B, IS39e-0855.8
NC_000913:1087062:109349810934981094364867Escherichia coli K12, complete genomeIS3 element protein InsF9e-0855.8
CP002516:44744:521675216753033867Escherichia coli KO11, complete genomeIntegrase catalytic region9e-0855.8
NC_010473:279948:290361290361291227867Escherichia coli str. K-12 substr. DH10B, complete genomeIS3 element protein InsF9e-0855.8
NC_011741:2091249:211327021132702114136867Escherichia coli IAI1 chromosome, complete genomeIS3 element protein InsF9e-0855.8
CU928160:2091249:211327021132702114136867Escherichia coli IAI1 chromosome, complete genomeIS3 element protein InsF9e-0855.8
NC_017328:1075535:109566610956661096532867Shigella flexneri 2002017 chromosome, complete genomeIS3, transposase orfB9e-0855.8
NC_012947:2189533:219422521942252195091867Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeIntegrase catalytic region9e-0855.8
NC_009801:3013838:302677030267703027636867Escherichia coli E24377A, complete genomeIS3, transposase orfB9e-0855.8
NC_004337:1065609:106951210695121070378867Shigella flexneri 2a str. 301, complete genomeIS3 ORF29e-0855.8
NC_010468:4059436:406845740684574069323867Escherichia coli ATCC 8739, complete genomeIntegrase catalytic region9e-0855.8
NC_008258:1076922:108889210888921089758867Shigella flexneri 5 str. 8401, complete genomeIS3 ORF29e-0855.8
NC_008258:2905413:291114829111482912014867Shigella flexneri 5 str. 8401, complete genomeIS3 ORF29e-0855.8
AC_000091:1083798:109469710946971095563867Escherichia coli W3110 DNA, complete genomeIS3 element protein InsF9e-0855.8
AC_000091:558920:566361566361567227867Escherichia coli W3110 DNA, complete genomeIS3 element protein InsF9e-0855.8
NC_013361:3651150:366508336650833665547465Escherichia coli O26:H11 str. 11368 chromosome, complete genome8e-0855.8
NC_004741:2741971:275188527518852752313429Shigella flexneri 2a str. 2457T, complete genomeIS3 orfB8e-0855.8
NC_010498:2278306:228095222809522281785834Escherichia coli SMS-3-5, complete genome8e-0855.8
NC_016902:44744:521675216753033867Escherichia coli KO11FL chromosome, complete genomeintegrase catalytic subunit9e-0855.8
NC_016902:1165726:117256111725611173427867Escherichia coli KO11FL chromosome, complete genomeintegrase catalytic subunit9e-0855.8
NC_012967:1593101:160827816082781609144867Escherichia coli B str. REL606 chromosome, complete genomeputative transposase for IS39e-0855.8
NC_012759:461680:469121469121469987867Escherichia coli BW2952 chromosome, complete genomeIS3 element protein InsF9e-0855.8
NC_011083:4547825:458547045854704586336867Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,ISEc16, orfB9e-0855.8
CP002185:2919752:293243029324302933296867Escherichia coli W, complete genomeIS3 Transposase ORF29e-0855.8
AC_000091:303719:314811314811315677867Escherichia coli W3110 DNA, complete genomeIS3 element protein InsF9e-0855.8
NC_010473:498252:505693505693506559867Escherichia coli str. K-12 substr. DH10B, complete genomeDLP12 prophage; IS3 element protein InsF9e-0855.8
NC_000913:303719:314811314811315677867Escherichia coli K12, complete genomeIS3 element protein InsF9e-0855.8
CP002185:4035502:405304040530404053906867Escherichia coli W, complete genomeIS3 Transposase ORF29e-0855.8
NC_000913:558920:566361566361567227867Escherichia coli K12, complete genomeDLP12 prophage; IS3 element protein InsF9e-0855.8
NC_013716:5201097:523569452356945236560867Citrobacter rodentium ICC168, complete genomeIS3 transposase B9e-0855.8
NC_004337:2747917:275725327572532758119867Shigella flexneri 2a str. 301, complete genomeIS3 ORF21e-0755.5
NC_017328:2785309:279613527961352797001867Shigella flexneri 2002017 chromosome, complete genomeIS3 ORF21e-0755.5
NC_013364:3701895:371893437189343719800867Escherichia coli O111:H- str. 11128, complete genomeputative IS3 transposase InsF9e-0855.5
NC_004741:3041294:309166830916683092534867Shigella flexneri 2a str. 2457T, complete genomeIS3 orfB9e-0855.5
NC_004337:3049118:310217931021793103045867Shigella flexneri 2a str. 301, complete genomeIS3 ORF29e-0855.5
NC_017328:3088907:314054631405463141412867Shigella flexneri 2002017 chromosome, complete genomeIS3 orfB9e-0855.5
NC_011415:3006794:302033130203313021197867Escherichia coli SE11 chromosome, complete genometransposase2e-0754.3
NC_020064:1409596:142179314217931422116324Serratia marcescens FGI94, complete genomehypothetical protein2e-0754.3
NC_016831:1865681:187488518748851875376492Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-0753.9
NC_012779:2127542:214378521437852144585801Edwardsiella ictaluri 93-146, complete genometransposase InsF for insertion sequence IS3A/B/C/D/E/fA4e-0753.5
NC_011205:1227373:123641812364181236957540Salmonella enterica subsp. enterica serovar Dublin str. CT_020218534e-0753.5
NC_016857:366908:368675368675369562888Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74IS3 transposase5e-0753.1
NC_006905:401154:413672413672414535864Salmonella enterica subsp. enterica serovar Choleraesuis strputative IS3 transposase5e-0753.1
NC_003197:367430:369197369197369997801Salmonella typhimurium LT2, complete genomeputative truncated IS3 transposase5e-0753.1
NC_016810:366908:368675368675369475801Salmonella enterica subsp. enterica serovar Typhimurium strputative IS3 transposase5e-0753.1
NC_016856:365665:369882369882370682801Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SIS3 transposase5e-0753.1
NC_016860:397138:410588410588411388801Salmonella enterica subsp. enterica serovar Typhimurium strIS3 transposase5e-0753.1
NC_016863:367404:369171369171369971801Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1IS3 transposase5e-0753.1
NC_017046:366905:368672368672369472801Salmonella enterica subsp. enterica serovar Typhimurium str. 798IS3 transposase5e-0753.1
NC_011205:4718239:472660647266064727139534Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-0651.6
NC_011294:4560902:456926945692694569802534Salmonella enterica subsp. enterica serovar Enteritidis strIS1230 transposase1e-0651.6
NC_016831:4517850:452641745264174526950534Salmonella enterica subsp. enterica serovar Gallinarum/pullorumIS1230 transposase1e-0651.6
NC_012214:1355500:136944813694481370302855Erwinia pyrifoliae Ep1/96, complete genomeTransposase, probable orf A2e-0651.2
NC_012214:1650523:165905116590511659905855Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, orf B2e-0651.2
NC_012214:2221702:226107322610732261927855Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, probale orf B2e-0651.2
NC_012214:1650523:166907016690701669924855Erwinia pyrifoliae Ep1/96, complete genomeTransposase, orf B2e-0651.2
NC_004337:3590323:381087238108723811264393Shigella flexneri 2a str. 301, complete genomehypothetical protein5e-0649.7
NC_004431:1166568:117462811746281175380753Escherichia coli CFT073, complete genomeTransposase insF for insertion sequence IS3A/B/C/D/E/fA7e-0649.3
NC_008253:296500:303560303560304414855Escherichia coli 536, complete genometransposase8e-0649.3
NC_020064:3998715:406440140644014065255855Serratia marcescens FGI94, complete genometransposase8e-0649.3
NC_012214:1355500:136747713674771368205729Erwinia pyrifoliae Ep1/96, complete genomeTransposase IS3/IS911, probable orf B9e-0648.9
NC_013361:3287671:330811433081143308494381Escherichia coli O26:H11 str. 11368 chromosome, complete genome9e-0648.9