Pre_GI: BLASTP Hits

Some Help

Query: NC_011274:1094379:1121286 Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91

Start: 1121286, End: 1122023, Length: 738

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Salmonella gallinarum is the causative agent of Fowl typhoid, a severe systemic disease of poultry. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011205:1186097:121299412129941213731738Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type VI secretion-associated protein3e-122437
NC_016902:3863932:386393238639323864675744Escherichia coli KO11FL chromosome, complete genometype VI secretion-associated protein1e-82306
NC_016822:246715:259248259248259991744Shigella sonnei 53G, complete genometype VI secretion-associated protein1e-82306
CP002516:3863932:386393238639323864675744Escherichia coli KO11, complete genometype VI secretion-associated protein, VC_A0118 family1e-82306
CP002185:234719:247228247228247971744Escherichia coli W, complete genomeT6SS-associated protein1e-82306
NC_014029:3958811:396220539622053962891687Yersinia pestis Z176003 chromosome, complete genomehypothetical protein5e-49194
NC_009708:372422:375816375816376502687Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein5e-49194
NC_009381:222735:226120226120226806687Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein5e-49194
NC_003143:4006884:401027840102784010964687Yersinia pestis CO92, complete genomehypothetical protein5e-49194
NC_017154:3898925:390231939023193903005687Yersinia pestis D106004 chromosome, complete genomehypothetical protein5e-49194
NC_017168:1631052:163444616344461635132687Yersinia pestis A1122 chromosome, complete genomehypothetical protein5e-49194
NC_017265:4265659:428327642832764283962687Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein5e-49194
NC_010465:429095:432489432489433175687Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein3e-49194
NC_010634:4234932:425159642515964252282687Yersinia pseudotuberculosis PB1/+, complete genomehypothetical protein3e-49194
NC_006155:4302826:432049943204994321185687Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein3e-49194
NC_005126:349658:387412387412388059648Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-45181
NC_012962:293976:307169307169307816648Photorhabdus asymbiotica, complete genomehypothetical protein1e-43176
NC_014228:4331327:434334743433474344018672Xenorhabdus nematophila ATCC 19061, complete genomeconserved hypothetical protein (probable component of SST VI cluster)3e-41168
NC_013892:274297:282828282828283493666Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein5e-40164
NC_015968:4117835:4141012414101241431262115Enterobacter asburiae LF7a chromosome, complete genomeSigma 54 interacting domain-containing protein2e-34145
NC_012913:1832500:184679518467951847421627Aggregatibacter aphrophilus NJ8700, complete genomehypothetical protein4e-0858.5