Pre_GI: BLASTN Hits

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Query: NC_011248:23500 Borrelia duttonii Ly plasmid pl35, complete sequence

Start: 23500, End: 46999, Length: 23500

Host Lineage: Borrelia duttonii; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Borrelia duttonii Ly was isolated from a 2-year-old girl with tick-borne relapsing fever in Tanzania. Borrelia duttonii is the causative agent of tick-borne relapsing fever in east Africa. This disease is endemic in much of east Africa and is one of the top 10 diseases associated with deaths in children under the age of five. This disease is transmitted by the bite of the soft-bodied tick Ornithodoros moubata. Ticks become infected with Borrelia duttonii while feeding on an infected rodent. Borrelia then multiplies rapidly, causing a generalized infection throughout the tick. While feeding, the tick passes the organism into a mammalian host through its infectious saliva. Humans become exposed to the infected ticks through contact with rodents or rodent nests. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011250:1192119211Borrelia duttonii Ly plasmid pl40, complete sequence01691BLASTN svgBLASTP svg
NC_011229:111265612656Borrelia duttonii Ly, complete genome01633BLASTN svgBLASTP svg
NC_011264:11018110183699925982Borrelia duttonii Ly plasmid pl32, complete sequence01403BLASTN svgBLASTP svg
NC_011251:25946259465199926054Borrelia duttonii Ly plasmid pl41, complete sequence01403BLASTN svgBLASTP svg
NC_011251:111209912099Borrelia duttonii Ly plasmid pl41, complete sequence01154BLASTN svgBLASTP svg
NC_011262:13649136493599922351Borrelia duttonii Ly plasmid pl31, complete sequence2e-133484BLASTN svgBLASTP svg
NC_011256:37617376176999932383Borrelia duttonii Ly plasmid pl70, complete sequence2e-115424BLASTN svgBLASTP svg
NC_015906:49557495577599926443Borrelia bissettii DN127 plasmid cp32-quad, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_011247:11054511054513020319659Borrelia duttonii Ly plasmid pl165, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_015919:111437214372Borrelia bissettii DN127 plasmid lp54, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_008564:111910319103Borrelia afzelii PKo plasmid lp60, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_015906:114254642546Borrelia bissettii DN127 plasmid cp32-quad, complete sequence3e-0661.9BLASTN svgBLASTP svg
NC_001854:112315723157Borrelia burgdorferi B31 plasmid lp28-4, complete sequence3e-0661.9BLASTN svgBLASTP svg