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Query: NC_011244:94756 Borrelia recurrentis A1, complete genome

Start: 94756, End: 130886, Length: 36131

Host Lineage: Borrelia recurrentis; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Borrelia recurrentis isolated from adult patient with louse-borne relapsing fever in Ethiopia. Borrelia recurrentis is the causative agent of louse-borne relapsing fever. Prior to World War II, this organism was responsible for large disease outbreaks with a mortality of up to 40% in much of the world. Currently this disease is limited to parts of Africa, China, and Peru. B. recurrentis is transmitted when infected human body lice (Pediculus humanus) are crushed and their fluids contaminate mucous membranes or breaks in the skin. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008710:79100*7910010268323584Borrelia turicatae 91E135, complete genome02815BLASTN svgBLASTP svg
NC_010673:82586*8258610109918514Borrelia hermsii DAH, complete genome02807BLASTN svgBLASTP svg
NC_008710:108057*10805713056722511Borrelia turicatae 91E135, complete genome01388BLASTN svgBLASTP svg
NC_010673:113133*11313313311219980Borrelia hermsii DAH, complete genome0662BLASTN svgBLASTP svg
NC_018664:2357882*2357882238773229851Clostridium acidurici 9a chromosome, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_015601:1107961*1107961115047842518Erysipelothrix rhusiopathiae str. Fujisawa, complete genome7e-1177.8BLASTN svgBLASTP svg
NC_004557:81362*8136210417722816Clostridium tetani E88, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_008312:6801445*6801445682609924655Trichodesmium erythraeum IMS101, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_003454:677699*67769970224424546Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete2e-0869.9BLASTN svgBLASTP svg
NC_018677:111500*11150014809936600Candidatus Portiera aleyrodidarum BT-B-HRs chromosome, complete3e-0765.9BLASTN svgBLASTP svg
NC_015914:3197772*3197772322471226941Cyclobacterium marinum DSM 745 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_012563:3374904*3374904339859023687Clostridium botulinum A2 str. Kyoto, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010723:485874*48587450809922226Clostridium botulinum E3 str. Alaska E43, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010520:3204480*3204480322378019301Clostridium botulinum A3 str. Loch Maree, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010516:3196158*3196158321545819301Clostridium botulinum B1 str. Okra, complete genome4e-0661.9BLASTN svgBLASTP svg