Pre_GI: BLASTP Hits

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Query: NC_011244:1:826 Borrelia recurrentis A1, complete genome

Start: 826, End: 1242, Length: 417

Host Lineage: Borrelia recurrentis; Borrelia; Spirochaetaceae; Spirochaetales; Spirochaetes; Bacteria

General Information: Borrelia recurrentis isolated from adult patient with louse-borne relapsing fever in Ethiopia. Borrelia recurrentis is the causative agent of louse-borne relapsing fever. Prior to World War II, this organism was responsible for large disease outbreaks with a mortality of up to 40% in much of the world. Currently this disease is limited to parts of Africa, China, and Peru. B. recurrentis is transmitted when infected human body lice (Pediculus humanus) are crushed and their fluids contaminate mucous membranes or breaks in the skin. Relapsing fever is characterized by a period of chills, fever, headache, and malaise, an asymptomatic period, followed by another episode of symptoms. This cycle of relapsing is due to changes in the surface proteins of Borrelia, which allow it to avoid detection and removal by the host immune system. This antigenic variation is the result of homologous recombination of silent proteins into an expressed locus, causing partial or complete replacement of one serotype with another.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011250:1:8099809992111113Borrelia duttonii Ly plasmid pl40, complete sequencevlp protein, gamma subfamily1e-35148
NC_011229:1:3342334244211080Borrelia duttonii Ly, complete genomevlp protein, gamma subfamily7e-27119
NC_011248:23500:7752775288191068Borrelia duttonii Ly plasmid pl35, complete sequencevlp protein, gamma subfamily2e-2097.4
NC_011229:1:476147615637877Borrelia duttonii Ly, complete genome4e-2096.7
NC_011256:37617:4696546965479871023Borrelia duttonii Ly plasmid pl70, complete sequencevlp protein, gamma subfamily2e-1994.4
NC_011244:1:9377937710306930Borrelia recurrentis A1, complete genome2e-1994.4
NC_011264:11018:249692496925887919Borrelia duttonii Ly plasmid pl32, complete sequence2e-1994
NC_011251:25946:376193761938596978Borrelia duttonii Ly plasmid pl41, complete sequencevlp protein5e-1993.2
NC_011262:13649:2908129081301871107Borrelia duttonii Ly plasmid pl31, complete sequencevlp protein, gamma subfamily6e-1992.8
NC_011251:25946:3188731887329931107Borrelia duttonii Ly plasmid pl41, complete sequencevlp protein, gamma subfamily6e-1992.8
NC_011262:13649:2314023140242641125Borrelia duttonii Ly plasmid pl31, complete sequencevlp protein, gamma subfamily3e-1580.5
NC_011251:25946:2594625946270701125Borrelia duttonii Ly plasmid pl41, complete sequencevlp protein, gamma subfamily3e-1580.5
NC_011229:1:211321133060948Borrelia duttonii Ly, complete genomevlp protein, gamma subfamily3e-1580.1
NC_011256:37617:5698856988580191032Borrelia duttonii Ly plasmid pl70, complete sequencevlp protein, delta subfamily1e-1375.1
NC_011248:23500:260952609527036942Borrelia duttonii Ly plasmid pl35, complete sequencevlp protein, gamma subfamily1e-1272
NC_011248:23500:90319031100561026Borrelia duttonii Ly plasmid pl35, complete sequencevlp protein, delta subfamily3e-1270.5
NC_011251:1:2399239934301032Borrelia duttonii Ly plasmid pl41, complete sequencevlp protein, delta subfamily4e-1270.1
NC_011251:25946:2399239934301032Borrelia duttonii Ly plasmid pl41, complete sequencevlp protein, delta subfamily4e-1270.1
NC_011251:25946:357883578836756969Borrelia duttonii Ly plasmid pl41, complete sequencevlp protein, delta subfamily7e-1269.3
NC_011262:13649:16516512141050Borrelia duttonii Ly plasmid pl31, complete sequencevlp protein, delta subfamily9e-1268.9
NC_011251:25946:3318033180342081029Borrelia duttonii Ly plasmid pl41, complete sequencevlp protein, delta subfamily3e-1167
NC_011251:1:365036504642993Borrelia duttonii Ly plasmid pl41, complete sequencevlp protein, delta subfamily4e-1166.6
NC_011251:25946:365036504642993Borrelia duttonii Ly plasmid pl41, complete sequencevlp protein, delta subfamily4e-1166.6
NC_011264:11018:1313613136141581023Borrelia duttonii Ly plasmid pl32, complete sequencevlp protein, delta subfamily1e-1065.1
NC_011264:11018:483748375811975Borrelia duttonii Ly plasmid pl32, complete sequencevlp protein, delta subfamily3e-1063.9
NC_011256:37617:421914219143180990Borrelia duttonii Ly plasmid pl70, complete sequencevlp protein, delta subfamily3e-1063.5
NC_011248:23500:116451164512193549Borrelia duttonii Ly plasmid pl35, complete sequence5e-1063.2
NC_011250:1:174017401976237Borrelia duttonii Ly plasmid pl40, complete sequence2e-0961.6
NC_011264:11018:110181101812000983Borrelia duttonii Ly plasmid pl32, complete sequence2e-0961.6
NC_011251:25946:4918491859611044Borrelia duttonii Ly plasmid pl41, complete sequencevlp protein, delta subfamily2e-0961.6
NC_011251:1:4918491859611044Borrelia duttonii Ly plasmid pl41, complete sequencevlp protein, delta subfamily2e-0961.6
NC_011248:23500:247942479425744951Borrelia duttonii Ly plasmid pl35, complete sequencevlp protein, delta subfamily4e-0960.1
NC_011250:1:706370637850788Borrelia duttonii Ly plasmid pl40, complete sequence1e-0858.5
NC_011248:23500:2352823528246041077Borrelia duttonii Ly plasmid pl35, complete sequencevlp protein, delta subfamily2e-0857.8
NC_011248:23500:5397539764251029Borrelia duttonii Ly plasmid pl35, complete sequencevlp protein, delta subfamily5e-0856.2
NC_011251:25946:619961997130932Borrelia duttonii Ly plasmid pl41, complete sequence7e-0752.8
NC_011251:1:619961997130932Borrelia duttonii Ly plasmid pl41, complete sequence7e-0752.8
NC_011256:37617:5815458154591641011Borrelia duttonii Ly plasmid pl70, complete sequencevlp protein, gamma subfamily6e-0649.7