Pre_GI: BLASTP Hits

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Query: NC_011205:645591:650176 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 650176, End: 652089, Length: 1914

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:401154:4057234057234076361914Salmonella enterica subsp. enterica serovar Choleraesuis strTPA: injection protein01149
NC_013364:2612822:2623543262354326253811839Escherichia coli O111:H- str. 11128, complete genomeputative DNA injection protein0876
NC_011740:2072173:2084927208492720867711845Escherichia fergusonii ATCC 35469, complete genomeDNA transfer protein from phage0870
NC_013361:3254000:3270062327006232719061845Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA injection protein0867
NC_009800:320115:3236143236143254401827Escherichia coli HS, complete genomeputative injection protein0863
NC_010067:2529750:2564616256461625666131998Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-82308
NC_017328:335160:3400133400133420101998Shigella flexneri 2002017 chromosome, complete genomeGene 13 protein2e-81304
CP002516:1475521:1480335148033514823321998Escherichia coli KO11, complete genomehypothetical protein1e-81304
CP002185:2608000:2623525262352526255221998Escherichia coli W, complete genomehypothetical protein1e-81304
NC_016902:1475521:1480335148033514823321998Escherichia coli KO11FL chromosome, complete genomehypothetical protein1e-81304
NC_011083:403022:4076004076004095971998Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein1e-81304
NC_012125:1360593:1367046136704613690431998Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-79296
NC_016860:397138:4023154023154042911977Salmonella enterica subsp. enterica serovar Typhimurium strDNA transfer protein6e-74279
NC_007946:2593500:2606275260627526084342160Escherichia coli UTI89, complete genomeDNA transfer protein2e-73277
NC_015566:4350080:4365697436569743699474251Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-54214
NC_011742:2489000:2502643250264325046582016Escherichia coli S88 chromosome, complete genomeDNA transfer protein from bacteriophage6e-35149
NC_008563:2565876:2579546257954625815612016Escherichia coli APEC O1, complete genomehypothetical protein6e-35149