Pre_GI: BLASTP Hits

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Query: NC_011205:609464:625524 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 625524, End: 625856, Length: 333

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012125:1330066:134402713440271344365339Salmonella enterica subsp. enterica serovar Paratyphi C strainbacteriophage ST64T protein 245e-50196
NC_016860:364981:377118377118377420303Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-35147
NC_011147:2496808:251431725143172514619303Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-34145
NC_006511:2501500:251878125187812519083303Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-34145
NC_006905:368942:382199382199382501303Salmonella enterica subsp. enterica serovar Choleraesuis strantitermination protein2e-29127
NC_009778:2993218:301767730176773018009333Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-28122
NC_013282:1200993:121313312131331213474342Cronobacter turicensis, complete genomeProbable regulatory protein N4e-26116
NC_011740:2072173:211210021121002112525426Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein from phage origin1e-25114
NC_011751:1405381:141741414174141417806393Escherichia coli UMN026 chromosome, complete genomeputative regulatory protein N2e-22104
NC_011601:717072:728867728867729175309Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeearly gene regulator8e-22102
NC_017328:303987:316980316980317288309Shigella flexneri 2002017 chromosome, complete genomeantitermination of transcription at nut site protein5e-2199.8