Pre_GI: BLASTP Hits

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Query: NC_011205:609464:619546 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 619546, End: 620628, Length: 1083

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013364:1183000:118610011861001187095996Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-59230
NC_017046:2756000:276381627638162764514699Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage protein6e-57221
NC_016856:2812905:281828528182852818983699Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SEaa16e-57221
NC_011080:2761403:276678327667832767481699Salmonella enterica subsp. enterica serovar Newport str. SL254,Eaa16e-57221
NC_016845:1285435:130060613006061301559954Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Eaa11e-52207
NC_009800:289000:293833293833294474642Escherichia coli HS, complete genomehypothetical protein9e-42171
NC_011083:374000:379255379255379941687Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,Eaa protein2e-41169
NC_009648:1541699:154475115447511545362612Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-39163
NC_007946:2625461:263614426361442636716573Escherichia coli UTI89, complete genomehypothetical protein2e-33143
NC_009778:2993218:301214530121453012981837Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-27124
NC_011294:2053991:205626120562612057124864Salmonella enterica subsp. enterica serovar Enteritidis strphage protein4e-2099.4
NC_006905:368942:3749463749463761211176Salmonella enterica subsp. enterica serovar Choleraesuis strEaa protein1e-1894
NC_011205:2180598:218436221843622185111750Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein8e-1684.7
NC_013361:1558423:156185315618531562764912Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-1480.5
NC_013361:3651150:365492736549273655790864Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein9e-1374.7
NC_002655:1332961:133323813332381333861624Escherichia coli O157:H7 EDL933, complete genomeunknown protein encoded by bacteriophage BP-933W1e-1274.3
NC_011353:3276734:329188632918863292503618Escherichia coli O157:H7 str. EC4115 chromosome, complete genome3e-1169.7
NC_013008:3231414:324675732467573247374618Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein3e-1169.7
NC_016860:364981:371050371050371841792Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-1067.8
NC_010067:2304313:232186323218632322444582Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-1066.6
NC_017328:303987:312617312617313291675Shigella flexneri 2002017 chromosome, complete genomeputative bacteriophage protein8e-1065.1
NC_013364:1596278:161111016111101611463354Escherichia coli O111:H- str. 11128, complete genomehypothetical protein1e-0964.7
NC_011740:2769961:278246527824652783175711Escherichia fergusonii ATCC 35469, complete genomehypothetical protein1e-0964.3
NC_011601:2614691:262858426285842629216633Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-0964.3
NC_011601:717072:722714722714723346633Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein1e-0964.3
NC_013353:2911741:291747429174742918427954Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein5e-0962.4
AP010958:2911741:291747429174742918427954Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein5e-0962.4
NC_013353:5361207:536761653676165367996381Escherichia coli O103:H2 str. 12009, complete genomehypothetical protein1e-0860.8
AP010958:5361207:536761653676165367996381Escherichia coli O103:H2 str. 12009 DNA, complete genomehypothetical protein1e-0860.8
NC_013941:3300000:330934033093403309843504Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeValyl-tRNA synthetase2e-0757
NC_013361:3287671:330299633029963303583588Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-0653.9
NC_008258:269806:279662279662280501840Shigella flexneri 5 str. 8401, complete genomeputative bacteriophage protein4e-0652.8