Pre_GI: BLASTP Hits

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Query: NC_011205:4761598:4776791 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4776791, End: 4776994, Length: 204

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:4556761:457209445720944572297204Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein5e-34142
NC_011294:4604283:461948446194844619687204Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein5e-34142
NC_011274:4577402:459273545927354592938204Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein5e-34142
NC_010468:4059436:406534340653434065546204Escherichia coli ATCC 8739, complete genomeprotein of unknown function DUF4667e-32135
NC_015566:547387:572154572154572357204Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-28124
NC_015567:547500:572340572340572543204Serratia sp. AS9 chromosome, complete genomehypothetical protein2e-28124
NC_009832:622969:645557645557645760204Serratia proteamaculans 568, complete genomeprotein of unknown function DUF4662e-28124
NC_012880:1091486:109637610963761096579204Dickeya dadantii Ech703, complete genomeprotein of unknown function DUF4662e-27121
NC_014914:439285:459540459540459737198Taylorella equigenitalis MCE9 chromosome, complete genomeHypothetical small protein yjiX1e-1788.2
NC_015731:169989:172511172511172711201Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein2e-1787.8
NC_015856:4975815:499483449948344995040207Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein2e-1787.8
NC_008061:2582000:259763925976392597845207Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceprotein of unknown function DUF4662e-1684.3
NC_010515:1678487:172665617266561726862207Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceprotein of unknown function DUF4662e-1684.3
NC_013194:1040197:104300810430081043205198Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeprotein of unknown function DUF4663e-1684
NC_015731:313676:317904317904318104201Nitrosomonas sp. Is79A3 chromosome, complete genomehypothetical protein9e-1682.4
NC_008752:4665699:468349846834984683779282Acidovorax avenae subsp. citrulli AAC00-1, complete genomeprotein of unknown function DUF4661e-1478.6
NC_006510:591339:636769636769636972204Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-1064.7
NC_005966:2157677:217369821736982173934237Acinetobacter sp. ADP1, complete genomehypothetical protein8e-0752.4