Pre_GI: BLASTP Hits

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Query: NC_011205:4761598:4775447 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4775447, End: 4775749, Length: 303

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:4556761:457075045707504571052303Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-52203
NC_011294:4604283:461814046181404618442303Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein2e-52203
NC_011274:4577402:459139145913914591693303Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-52203
NC_010170:4800000:480673048067304807038309Bordetella petrii, complete genomehypothetical protein6e-2095.9
NC_011979:3070110:308510330851033085372270Geobacter sp. FRC-32, complete genomehypothetical protein8e-1889
NC_012751:1988280:199521819952181995532315Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completehypothetical protein1e-1788.2
NC_012751:1988280:199127819912781991592315Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completehypothetical protein1e-1788.2
NC_009483:4015777:402305940230594023349291Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein9e-1268.9
NC_015578:3495034:350839635083963508671276Treponema primitia ZAS-2 chromosome, complete genomehypothetical protein6e-1062.8
NC_004129:195347:209598209598209846249Pseudomonas fluorescens Pf-5, complete genomehypothetical protein1e-0961.6
NC_005125:1161000:118958311895831189852270Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-0961.2
NC_009512:1518113:155009115500911550345255Pseudomonas putida F1, complete genomehypothetical protein5e-0960.1
NC_014355:2321957:232395423239542324220267Candidatus Nitrospira defluvii, complete genomehypothetical protein2e-0754.3
NC_008751:1762562:178385417838541784171318Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomehypothetical protein4e-0753.5