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Query: NC_011205:4761598:4775173 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4775173, End: 4775460, Length: 288

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:4556761:457047645704764570763288Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein9e-42168
NC_011294:4604283:461786646178664618153288Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein9e-42168
NC_011274:4577402:459111745911174591404288Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein9e-42168
NC_011979:3070110:308535630853563085640285Geobacter sp. FRC-32, complete genomeprotein of unknown function DUF4975e-1889.7
NC_009483:936000:940304940304940570267Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein7e-1062.8
NC_009512:1518113:154983515498351550113279Pseudomonas putida F1, complete genomeprotein of unknown function DUF4971e-0858.5
NC_018012:1326553:133548113354811335753273Thiocystis violascens DSM 198 chromosome, complete genomehypothetical protein1e-0858.5
NC_009523:1025556:103423010342301034526297Roseiflexus sp. RS-1 chromosome, complete genomehypothetical protein2e-0858.2
NC_015581:1043394:105092910509291051207279Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomehypothetical protein2e-0857.8
NC_005125:1161000:118985711898571190162306Gloeobacter violaceus PCC 7421, complete genomehypothetical protein2e-0857.8
NC_011729:3955310:396396539639653964270306Cyanothece sp. PCC 7424 chromosome, complete genomehypothetical protein2e-0754.3
NC_004129:195347:209336209336209620285Pseudomonas fluorescens Pf-5, complete genomeProtein of unknown function (DUF497) superfamily3e-0753.9
NC_013960:1258000:126465312646531264946294Nitrosococcus halophilus Nc4 chromosome, complete genomeprotein of unknown function DUF4974e-0753.1
NC_011206:2040000:204975920497592050040282Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF4972e-0651.6
NC_011761:2131911:216171721617172161998282Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completehypothetical protein2e-0651.6
NC_011206:1264639:127698412769841277265282Acidithiobacillus ferrooxidans ATCC 53993, complete genomeprotein of unknown function DUF4972e-0651.2
NC_019940:866969:872795872795873088294Thioflavicoccus mobilis 8321 chromosome, complete genomehypothetical protein3e-0650.4
NC_014355:2321957:232371623237162324006291Candidatus Nitrospira defluvii, complete genomehypothetical protein7e-0649.3
NC_013960:1258000:126373412637341264015282Nitrosococcus halophilus Nc4 chromosome, complete genomeprotein of unknown function DUF4979e-0648.9