Pre_GI: BLASTP Hits

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Query: NC_011205:4761598:4772922 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4772922, End: 4774763, Length: 1842

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:4604283:4615608461560846174491842Salmonella enterica subsp. enterica serovar Enteritidis strtype I restriction enzyme01280
NC_011274:4577402:4588873458887345907141842Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type I restriction enzyme01280
NC_016831:4556761:4568232456823245700731842Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative Type I restriction enzyme01278
NC_011901:1860887:1879189187918918810481860Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeDNA helicase II1e-140500
NC_010995:764567:7645677645677664021836Cellvibrio japonicus Ueda107, complete genomeputative DNA helicase II2e-137489
NC_013716:5201097:5253209525320952550231815Citrobacter rodentium ICC168, complete genomeputative DNA helicase2e-134479
CU928145:3360967:3398367339836734001541788Escherichia coli 55989 chromosome, complete genomeputative UvrD/REP helicase5e-130465
NC_011748:3360967:3398367339836734001541788Escherichia coli 55989, complete genomeputative UvrD/REP helicase5e-130465
NC_008260:1885969:1904538190453819064331896Alcanivorax borkumensis SK2, complete genomeHypotetical protein7e-130464
NC_014924:3334386:3341593334159333434701878Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeNERD domain protein2e-125450
NC_010002:4038500:4045257404525740470621806Delftia acidovorans SPH-1, complete genomeNERD domain protein3e-121436
NC_019902:3397170:3401800340180034035691770Thioalkalivibrio nitratireducens DSM 14787, complete genomeDNA helicase II; NERD domain-containing protein1e-119431
NC_015726:3452232:3455641345564134574731833Cupriavidus necator N-1 chromosome 1, complete sequencehypothetical protein4e-119429
NC_014310:94645:99969999691018071839Ralstonia solanacearum PSI07 megaplasmid, complete sequencehelicase protein1e-113410
NC_003296:140889:1483601483601501981839Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completehypothetical protein6e-111401
NC_016935:7872425:7878284787828478802091926Paenibacillus mucilaginosus 3016 chromosome, complete genomeNERD domain-containing protein4e-67256
NC_015690:7785875:7806015780601578079401926Paenibacillus mucilaginosus KNP414 chromosome, complete genomeNERD domain-containing protein3e-66253
NC_011601:3338888:334355133435513344387837Escherichia coli O127:H6 str. E2348/69 chromosome, complete genome3e-61236
NC_002695:3852233:385677638567763857720945Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-60234
NC_002655:3919545:392408839240883925032945Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-60234
NC_011353:3956630:396117339611733962117945Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeDNA helicase II1e-60234
NC_013008:3911356:391589939158993916843945Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-60234
NC_013941:3676146:368068936806893681633945Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeDNA helicase II1e-60234
AP010958:3627355:363189836318983632773876Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-58226
AP010958:5090696:511426751142675115142876Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted truncated helicase3e-58226
NC_013353:3627355:363189836318983632773876Escherichia coli O103:H2 str. 12009, complete genome3e-58226
NC_013353:5090696:511426751142675115142876Escherichia coli O103:H2 str. 12009, complete genometruncated helicase3e-58226
NC_014253:312354:3422963422963441881893Methanohalobium evestigatum Z-7303 chromosome, complete genomehypothetical protein1e-24115
NC_008435:2368000:2394634239463423963551722Rhodopseudomonas palustris BisA53, complete genomehypothetical protein1e-1792.4
NC_008786:4579490:4593935459393545960852151Verminephrobacter eiseniae EF01-2, complete genomeUvrD/REP helicase3e-1687.4
NC_008261:421000:4293454293454318282484Clostridium perfringens ATCC 13124, complete genomehypothetical protein3e-1687.4
NC_015064:102224:1055191055191077112193Acidobacterium sp. MP5ACTX9 chromosome, complete genomeUvrD/REP helicase2e-1584.3
NC_018679:1738126:1756438175643817585702133Alteromonas macleodii str. 'Balearic Sea AD45' chromosome, completeputative DNA helicase8e-1582.4
NC_004722:4405363:4435208443520844366261419Bacillus cereus ATCC 14579, complete genomeSuperfamily I DNA and RNA helicases2e-1481.3
NC_013216:1442044:1461394146139414635142121Desulfotomaculum acetoxidans DSM 771, complete genomeUvrD/REP helicase2e-1481.3
NC_015711:2050360:2064044206404420657621719Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein2e-1377.8
NC_010334:2090990:2105103210510321071272025Shewanella halifaxensis HAW-EB4, complete genomehypothetical protein5e-1376.6
NC_017078:247045:2618732618732636031731Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,hypothetical protein7e-1376.3
NC_008228:4915500:4924775492477549265951821Pseudoalteromonas atlantica T6c, complete genomeNERD domain-containing family protein7e-1376.3
NC_011770:2499432:2515459251545925171831725Pseudomonas aeruginosa LESB58, complete genomehypothetical protein1e-1275.1
NC_008705:868623:8949708949708970812112Mycobacterium sp. KMS, complete genomeUvrD/REP helicase2e-1274.7
NC_008146:861319:8862418862418883522112Mycobacterium sp. MCS, complete genomeUvrD/REP helicase2e-1274.7
NC_008726:6393489:6431952643195264341652214Mycobacterium vanbaalenii PYR-1, complete genomeUvrD/REP helicase2e-1274.7
NC_008740:1484531:1492814149281414948652052Marinobacter aquaeolei VT8, complete genomesuperfamily I DNA and RNA helicase2e-1274.7
NC_020210:2133996:2176339217633921774361098Geobacillus sp. GHH01, complete genomehypothetical protein2e-1274.3
NC_013757:3897413:3909839390983939120972259Geodermatophilus obscurus DSM 43160, complete genomeUvrD/REP helicase3e-1274.3
NC_013457:1703201:1711753171175317136571905Vibrio sp. Ex25 chromosome 2, complete genomehypothetical protein3e-1274.3
NC_008596:1302000:1343125134312513453382214Mycobacterium smegmatis str. MC2 155, complete genomeUvrD/Rep helicase3e-1273.9
NC_010622:249625:2709012709012726401740Burkholderia phymatum STM815 chromosome 1, complete sequenceNERD domain protein4e-1273.6
NC_017080:166180:1808561808561829672112Phycisphaera mikurensis NBRC 102666, complete genomeputative helicase9e-1272.4
NC_005125:2887319:2900009290000929021322124Gloeobacter violaceus PCC 7421, complete genomehypothetical protein1e-1171.6
NC_003902:1220600:1233504123350412355822079Xanthomonas campestris pv. campestris str. ATCC 33913, completeputative DNA helicase2e-1171.6
NC_015576:612164:6325866325866348202235Mycobacterium sp. JDM601 chromosome, complete genomeUvrD/Rep helicase4e-1170.5
NC_008278:6854759:6868682686868268708412160Frankia alni ACN14a, complete genomeputative DNA helicase8e-1169.3
NC_007645:5801295:5823205582320558252322028Hahella chejuensis KCTC 2396, complete genomeSuperfamily I DNA and RNA helicase8e-1169.3
NC_012034:6469:3152031520339792460Anaerocellum thermophilum DSM 6725, complete genomeLexA repressor4e-1067
NC_011880:56543:6051160511625982088Cyanothece sp. PCC 7425 plasmid pP742501, complete sequenceUvrD/REP helicase7e-1066.2
NC_013441:382597:3963933963933985372145Gordonia bronchialis DSM 43247, complete genomeUvrD/REP helicase7e-1066.2
NC_014210:3248526:3270944327094432730612118Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,UvrD/REP helicase8e-1065.9
NC_016010:1247008:1261395126139512634732079Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeSuperfamily I DNA and RNA helicase2e-0964.7
NC_014924:2399524:2413540241354024147421203Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomesuperfamily I DNA/RNA helicase2e-0964.7
NC_014720:4170:2587325873283322460Caldicellulosiruptor kronotskyensis 2002 chromosome, completelexa repressor3e-0964.3
NC_012811:317308:3394763394763414762001Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative ATP-dependent DNA helicase3e-0964.3
NC_006177:1422932:1438983143898314410642082Symbiobacterium thermophilum IAM 14863, complete genomeputative DNA helicase5e-0963.2
NC_011386:136223:1535621535621551691608Oligotropha carboxidovorans OM5, complete genomenuclease-related domain family6e-0963.2
NC_015684:362236:3735403735403751471608Oligotropha carboxidovorans OM5 chromosome, complete genomehypothetical protein6e-0963.2
NC_009434:3611738:3712833371283337149202088Pseudomonas stutzeri A1501, complete genomeputative DNA helicase9e-0962.4
NC_017068:1143515:1166667116666711688052139Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative UvrD/REP family DNA helicase1e-0862.4
NC_009523:2769154:2783054278305427851862133Roseiflexus sp. RS-1 chromosome, complete genomeUvrD/REP helicase1e-0862.4
NC_011958:1031592:103742410374241038389966Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein2e-0861.2
NC_011662:386162:3980613980613992271167Thauera sp. MZ1T, complete genomehypothetical protein3e-0860.8
NC_015696:610000:6267886267886290162229Francisella sp. TX077308 chromosome, complete genomeATP-dependent DNA helicase UvrD/PcrA4e-0860.5
NC_007510:973828:9833809833809867033324Burkholderia sp. 383 chromosome 1, complete sequenceSuperfamily I DNA and RNA helicases-like1e-0758.9
NC_019903:1745849:1745849174584917472641416Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,DNA/RNA helicase2e-0757.8
NC_010554:2646806:2704877270487727070122136Proteus mirabilis HI4320, complete genomeDNA helicase2e-0757.8
NC_014837:1144500:1151150115115011545423393Pantoea sp. At-9b chromosome, complete genomeUvrD/REP helicase3e-0757.4
NC_019902:1061432:108987610898761090442567Thioalkalivibrio nitratireducens DSM 14787, complete genomeDNA helicase II related protein4e-0757
NC_017093:6461486:6459294645929464614892196Actinoplanes missouriensis 431, complete genomeputative DNA helicase6e-0756.6
NC_020210:1275031:1294813129481312964831671Geobacillus sp. GHH01, complete genomehypothetical protein6e-0756.2
NC_006510:1400000:1415631141563114173011671Geobacillus kaustophilus HTA426, complete genomehypothetical protein4e-0653.9
NC_008278:744777:7563847563847576581275Frankia alni ACN14a, complete genomePutative DNA helicase7e-0652.8