Pre_GI: BLASTP Hits

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Query: NC_011205:4718239:4743341 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4743341, End: 4744252, Length: 912

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:4703266:472785447278544728765912Salmonella enterica subsp. enterica serovar Newport str. SL254,putative cytoplasmic protein6e-159560
NC_010102:4745949:476399447639944764905912Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein9e-159559
NC_012125:4716000:474344747434474744358912Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein6e-158556
NC_006905:4638707:466613246661324667043912Salmonella enterica subsp. enterica serovar Choleraesuis strputative cytoplasmic protein7e-158556
NC_011294:4560902:458601445860144586925912Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein7e-156549
NC_011147:4460726:449496244949624495873912Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein2e-155548
NC_004631:4687270:470537547053754706286912Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-153542
NC_015761:4355335:437175543717554372666912Salmonella bongori NCTC 12419, complete genomehypothetical protein7e-130463
NC_011747:115864:119318119318120259942Escherichia coli S88 plasmid pECOS88, complete sequencehypothetical protein2e-1273.2
NC_009837:127000:133063133063134004942Escherichia coli APEC O1 plasmid pAPEC-O1-ColBM, complete sequencehypothetical protein2e-1273.2
NC_010334:2615260:263425226342522635220969Shewanella halifaxensis HAW-EB4, complete genomehypothetical protein1e-1067.4