Pre_GI: BLASTP Hits

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Query: NC_011205:4718239:4727548 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 4727548, End: 4728084, Length: 537

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011294:4560902:457021145702114570747537Salmonella enterica subsp. enterica serovar Enteritidis strfimbrial protein1e-81301
NC_011274:4538722:454806945480694548566498Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91fimbrial protein1e-71268
NC_011147:4460726:446793444679344468431498Salmonella enterica subsp. enterica serovar Paratyphi A strfimbrial structural protein2e-68258
NC_006511:4465495:447270444727044473201498Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCfimbrial structural protein2e-68258
NC_003198:4676536:469695846969584697451494Salmonella enterica subsp. enterica serovar Typhi str. CT18,2e-30131